RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 VMA21Q3ZAQ7 101 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 SSX8Q7RTT4 187 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 SSBP4Q9BWG4 385 aaPredicted RBP10.32□□□□□ -0.76
ZIC3-201ENST00000287538 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 FAM168AQ92567 244 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 ST20Q9HBF5 79 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 A0A087X0K7 114 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 MIR17HGQ75NE6 70 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
ZIC3-201ENST00000287538 TMEM186Q96B77 213 aa10.32□□□□□ -0.76
ZIC3-201ENST00000287538 ISLRO14498 428 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 LIPFP07098 398 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 CAMPP49913 170 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 NBEAP1P0C6P0 100 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 NOTCH3Q9UM47 2321 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 ANKRD17O75179 2603 aaKnown RBP10.31□□□□□ -0.76
ZIC3-201ENST00000287538 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 H0Y8G0 127 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 H3BTX0 84 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 TIMM23O14925 209 aa10.31□□□□□ -0.76
ZIC3-201ENST00000287538 ITLN2Q8WWU7 325 aaPredicted RBP10.31□□□□□ -0.76
ZIC3-201ENST00000287538 PEF1Q9UBV8 284 aaKnown RBP10.31□□□□□ -0.76
ZIC3-201ENST00000287538 MYO9AB2RTY4 2548 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 CD5LO43866 347 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 MOSP00540 346 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 AREGP15514 252 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 ORM2P19652 201 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 LINC00173Q6ZV60 143 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 TMEM14BQ9NUH8 114 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
ZIC3-201ENST00000287538 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 FER1L6-AS1Q8NA97 138 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
ZIC3-201ENST00000287538 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 CELSR2Q9HCU4 2923 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 GDF5OSQ5U4N7 250 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 OSR1Q8TAX0 266 aaPredicted RBP10.3□□□□□ -0.76
ZIC3-201ENST00000287538 CHRDL1Q9BU40 450 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 ZNF355PQ9NSJ1 428 aa10.3□□□□□ -0.76
ZIC3-201ENST00000287538 IGLC1P0CG04 106 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 SSBP2P81877 361 aaPredicted RBP10.29□□□□□ -0.76
ZIC3-201ENST00000287538 OR1B1Q8NGR6 318 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 FNDC4Q9H6D8 234 aaPredicted RBP10.29□□□□□ -0.76
ZIC3-201ENST00000287538 IGHV1-3A0A0C4DH29 117 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 GOSR1O95249 250 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 HTR1DP28221 377 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 WT1-ASQ06250 92 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 FBXL19-AS1Q494R0 122 aa10.29□□□□□ -0.76
ZIC3-201ENST00000287538 FOXA2Q9Y261 457 aaPredicted RBP10.29□□□□□ -0.76
ZIC3-201ENST00000287538 C7orf71A4D174 169 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 C1orf159Q96HA4 380 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 TIMM8BQ9Y5J9 83 aaPredicted RBP10.28□□□□□ -0.76
ZIC3-201ENST00000287538 IGHV3-35A0A0C4DH35 117 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 BUB1B-PAK6H3BSN5 160 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 SNAI2O43623 268 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 PAX2Q02962 417 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 OR52E5Q8NH55 327 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 ZANQ9Y493 2812 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
ZIC3-201ENST00000287538 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 KAAG1Q9UBP8 84 aa10.28□□□□□ -0.76
ZIC3-201ENST00000287538 TRAV5A0A0B4J249 113 aa10.27□□□□□ -0.76
ZIC3-201ENST00000287538 FOXA3P55318 350 aaPredicted RBP10.27□□□□□ -0.76
ZIC3-201ENST00000287538 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.76
ZIC3-201ENST00000287538 PERPQ96FX8 193 aa10.27□□□□□ -0.76
ZIC3-201ENST00000287538 AP1S3Q96PC3 154 aa10.27□□□□□ -0.76
ZIC3-201ENST00000287538 TMEM191AQ9H0A3 160 aa10.27□□□□□ -0.76
ZIC3-201ENST00000287538 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.76
ZIC3-201ENST00000287538 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 GGTLC3B5MD39 225 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 ZFP36P26651 326 aaKnown RBP10.27□□□□□ -0.77
ZIC3-201ENST00000287538 S100A7AQ86SG5 101 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 NUP35Q8NFH5 326 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 VSTM2AQ8TAG5 236 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 LINC00479Q96M42 142 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
ZIC3-201ENST00000287538 IGHV3OR16-8A0A075B7F1 116 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 A0A1W2PPI3 338 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 PRSS46E5RG02 174 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 IGHV3-23P01764 117 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 RBP4P02753 201 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 MC5RP33032 325 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 PDPNQ86YL7 162 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 PMCHL2Q9BQD1 86 aa10.27□□□□□ -0.77
ZIC3-201ENST00000287538 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
ZIC3-201ENST00000287538 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
ZIC3-201ENST00000287538 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 ACANP16112 2415 aa10.26□□□□□ -0.77
ZIC3-201ENST00000287538 GPR183P32249 361 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms