RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FXYD7P58549 80 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 UHRF2Q96PU4 802 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
HMGN3-201ENST00000275036 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 ELOA3CA0A087WX78 387 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-201ENST00000275036 L7N2F9 121 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 HYPMO75409 117 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 MIFP14174 115 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 SELENOTP62341 195 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 VAMP2P63027 116 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 IGFL4Q6B9Z1 124 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 HIGD1AQ9Y241 93 aa10.42□□□□□ -0.74
HMGN3-201ENST00000275036 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 A0A0J9YX75 114 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 AGPAT2O15120 278 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 DEDDO75618 318 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 OR5G3P0C626 314 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 MEOX2P50222 304 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 RAP2BP61225 183 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
HMGN3-201ENST00000275036 GPR82Q96P67 336 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 MGST2Q99735 147 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 ARL6Q9H0F7 186 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 SLC35B3Q9H1N7 401 aa10.41□□□□□ -0.74
HMGN3-201ENST00000275036 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
HMGN3-201ENST00000275036 CST7O76096 145 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 BCAP31P51572 246 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 CAV2P51636 162 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 RAB32Q13637 225 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 FAM78BQ5VT40 261 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.74
HMGN3-201ENST00000275036 NRARPQ7Z6K4 114 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 RPP25LQ8N5L8 163 aaKnown RBP10.4□□□□□ -0.74
HMGN3-201ENST00000275036 RNF182Q8N6D2 247 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 OR4B1Q8NGF8 309 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 ENKURQ8TC29 256 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
HMGN3-201ENST00000275036 IGSF23A1L1A6 192 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
HMGN3-201ENST00000275036 S100A10P60903 97 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 SAMD13Q5VXD3 122 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 ARV1Q9H2C2 271 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 RPRMQ9NS64 109 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 LYRM2Q9NU23 88 aaPredicted RBP10.39□□□□□ -0.75
HMGN3-201ENST00000275036 CELA1Q9UNI1 258 aa10.39□□□□□ -0.75
HMGN3-201ENST00000275036 A8MTW9 85 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF705FA8MVS1 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-201ENST00000275036 GOSR2O14653 212 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 SIX6O95475 246 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF705DP0CH99 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF705BP0CI00 300 aaPredicted RBP10.38□□□□□ -0.75
HMGN3-201ENST00000275036 RPL7P18124 248 aaKnown RBP10.38□□□□□ -0.75
HMGN3-201ENST00000275036 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 S100A7P31151 101 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 FGL1Q08830 312 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 MORN5Q5VZ52 161 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 TMEM37Q8WXS4 190 aa10.38□□□□□ -0.75
HMGN3-201ENST00000275036 A0A087X0K7 114 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
HMGN3-201ENST00000275036 PSG9Q00887 426 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 VWC2Q2TAL6 325 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 Q6ZTC4 211 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 TMEM252Q8N6L7 170 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
HMGN3-201ENST00000275036 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
HMGN3-201ENST00000275036 CAMLGP49069 296 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 SULT1A1P50225 295 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PRR20EP86478 221 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PRR20CP86479 221 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PRR20DP86480 221 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PRR20BP86481 221 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PRR20AP86496 221 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 PXDC1Q5TGL8 231 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 MIC13Q5XKP0 118 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 ZNF767PQ75MW2 155 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 C1orf158Q8N1D5 194 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 NEU1Q99519 415 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 GPN1Q9HCN4 374 aaPredicted RBP10.36□□□□□ -0.75
HMGN3-201ENST00000275036 UQCC1Q9NVA1 299 aa10.36□□□□□ -0.75
HMGN3-201ENST00000275036 INMT-MINDY4F8WBC2 141 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms