RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 H2AFB2P0C5Z0 115 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 LINC00869P0C866 280 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 FXYD7P58549 80 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 ARL16Q0P5N6 197 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 FAM78BQ5VT40 261 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 LGALS9CQ6DKI2 356 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 TEPPQ6URK8 271 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
USE1-201ENST00000263897 NEU1Q99519 415 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 GGACTQ9BVM4 153 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 HYDINQ4G0P3 5121 aa11.59□□□□□ -0.55
USE1-201ENST00000263897 FAM240BA0A1B0GVZ2 78 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 C5orf51A6NDU8 294 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
USE1-201ENST00000263897 FAM25EA8MYX2 175 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 OR5G3P0C626 314 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
USE1-201ENST00000263897 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
USE1-201ENST00000263897 TCTAP57738 103 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 PSG9Q00887 426 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 ZNF709Q8N972 641 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 S100ZQ8WXG8 99 aa11.58□□□□□ -0.56
USE1-201ENST00000263897 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 L7N2F9 121 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 RPL7P18124 248 aaKnown RBP11.57□□□□□ -0.56
USE1-201ENST00000263897 VAMP2P63027 116 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 MZT2BQ6NZ67 158 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 PATE2Q6UY27 113 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 C2orf50Q96LR7 162 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 ARL6Q9H0F7 186 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 SLC35B3Q9H1N7 401 aa11.57□□□□□ -0.56
USE1-201ENST00000263897 LSM5Q9Y4Y9 91 aaKnown RBP11.57□□□□□ -0.56
USE1-201ENST00000263897 TRAV8-2A0A0B4J237 113 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 A8MTW9 85 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 IGLL5B9A064 214 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 GOSR2O14653 212 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 FGL1Q08830 312 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 SLC38A11Q08AI6 406 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 ASAH1Q13510 395 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 PXDC1Q5TGL8 231 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 IGFL4Q6B9Z1 124 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 Q6ZTC4 211 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 C11orf1Q9H5F2 150 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 APLNQ9ULZ1 77 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 CELA1Q9UNI1 258 aa11.56□□□□□ -0.56
USE1-201ENST00000263897 IGHV3OR16-12A0A075B7B8 117 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 TRAV10A0A0B4J240 114 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 A6NHS1 94 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 AGPAT2O15120 278 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 BCAP31P51572 246 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 IL15RAQ13261 267 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 C12orf74Q32Q52 190 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 AMTNQ6UX39 209 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 RNF24Q9Y225 148 aa11.55□□□□□ -0.56
USE1-201ENST00000263897 TMEM189A5PLL7 270 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 CAV2P51636 162 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 ZNF546Q86UE3 836 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 C1orf158Q8N1D5 194 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 RNF182Q8N6D2 247 aa11.54□□□□□ -0.56
USE1-201ENST00000263897 A0A087X0K7 114 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 CST7O76096 145 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 DUSP14O95147 198 aaKnown RBP11.53□□□□□ -0.56
USE1-201ENST00000263897 PVALBP20472 110 aaPredicted RBP11.53□□□□□ -0.56
USE1-201ENST00000263897 ZNF767PQ75MW2 155 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 RPP25LQ8N5L8 163 aaKnown RBP11.53□□□□□ -0.56
USE1-201ENST00000263897 MGST2Q99735 147 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 GOLT1BQ9Y3E0 138 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 RFNGQ9Y644 331 aa11.53□□□□□ -0.56
USE1-201ENST00000263897 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
USE1-201ENST00000263897 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 CXCL3P19876 107 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
USE1-201ENST00000263897 RAB31Q13636 194 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 RAB32Q13637 225 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 TMEM37Q8WXS4 190 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 IGF2BP2-AS1Q96M15 143 aa11.52□□□□□ -0.57
USE1-201ENST00000263897 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 UPK1BO75841 260 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 CAMLGP49069 296 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 EMP1P54849 157 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 S100A10P60903 97 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 PSG3Q16557 428 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 ZNF738Q8NE65 137 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 OR11H7Q8NGC8 314 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 RNF126Q9BV68 326 aa11.51□□□□□ -0.57
USE1-201ENST00000263897 LYRM2Q9NU23 88 aaPredicted RBP11.51□□□□□ -0.57
USE1-201ENST00000263897 EPPK1P58107 5090 aaKnown RBP11.5□□□□□ -0.57
USE1-201ENST00000263897 IGHV4-4A0A075B6R2 117 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 COX7A2P2O60397 106 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 HBE1P02100 147 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 AMBPP02760 352 aa11.5□□□□□ -0.57
USE1-201ENST00000263897 S100A11P31949 105 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms