RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 SERF2P84101 59 aa12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 GPR82Q96P67 336 aa12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 ZNF471Q9BX82 626 aaPredicted RBP12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 SLC25A32Q9H2D1 315 aa12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
CHCHD3-201ENST00000262570 FAM78BQ5VT40 261 aa12.46□□□□□ -0.42
CHCHD3-201ENST00000262570 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.42
CHCHD3-201ENST00000262570 MS4A6AQ9H2W1 248 aa12.46□□□□□ -0.42
CHCHD3-201ENST00000262570 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
CHCHD3-201ENST00000262570 M6PRP20645 277 aa12.45□□□□□ -0.42
CHCHD3-201ENST00000262570 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
CHCHD3-201ENST00000262570 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
CHCHD3-201ENST00000262570 PRR25Q96S07 402 aa12.45□□□□□ -0.42
CHCHD3-201ENST00000262570 TRAV5A0A0B4J249 113 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 SPP1P10451 314 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 GALR1P47211 349 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 NKX2-5P52952 324 aaPredicted RBP12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 DCANP1Q8TF63 244 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 NRN1Q9NPD7 142 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 SMAD5-AS1Q9Y6J3 95 aa12.44□□□□□ -0.42
CHCHD3-201ENST00000262570 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 OR4C46A6NHA9 309 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 TFPI2P48307 235 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 EIF5AP63241 154 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 SPATA31B1PQ5VZV4 182 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 C17orf77Q96MU5 243 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 FUT9Q9Y231 359 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 MBP02144 154 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 PRB2P02812 416 aaPredicted RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 RAB2AP61019 212 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 OR10G4Q8NGN3 311 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 OR10G9Q8NGN4 311 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 OR10G7Q8NGN6 311 aa12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 AURKAIP1Q9NWT8 199 aaPredicted RBP12.43□□□□□ -0.42
CHCHD3-201ENST00000262570 K7EQG2 157 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 CD7P09564 240 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 SEC11BP0C7V7 166 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 RHOBP62745 196 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 Q8N1Y9 231 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
CHCHD3-201ENST00000262570 C4BPBP20851 252 aa12.41□□□□□ -0.42
CHCHD3-201ENST00000262570 CD81P60033 236 aa12.41□□□□□ -0.42
CHCHD3-201ENST00000262570 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
CHCHD3-201ENST00000262570 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
CHCHD3-201ENST00000262570 RPRMQ9NS64 109 aa12.41□□□□□ -0.42
CHCHD3-201ENST00000262570 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 C19orf73Q9NVV2 129 aa12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 TMEM14CQ9P0S9 112 aa12.4□□□□□ -0.42
CHCHD3-201ENST00000262570 A0A087X0K7 114 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 SOCS3O14543 225 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 IGLC2P0DOY2 106 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 MEOX2P50222 304 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 FAM122CQ6P4D5 195 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 FAM24BQ8N5W8 94 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 FAM110AQ9BQ89 295 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 HRH4Q9H3N8 390 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 CDC34P49427 236 aaPredicted RBP12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 BOLA1Q9Y3E2 137 aa12.39□□□□□ -0.43
CHCHD3-201ENST00000262570 FBN3Q75N90 2809 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 H3BQ15 152 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 K7EIL1 84 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 SNRPCP09234 159 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 PYYP10082 97 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 TAS2R45P59539 299 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 TMED6Q8WW62 240 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
CHCHD3-201ENST00000262570 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 DEFA6Q01524 100 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 KHDC3LQ587J8 217 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 RAB24Q969Q5 203 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 ACTR3CQ9C0K3 210 aaPredicted RBP12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
CHCHD3-201ENST00000262570 UMAD1C9J7I0 102 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms