RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SP9P0CG40 484 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 LYZL1Q6UWQ5 148 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 SCGB3A1Q96QR1 104 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 TMEM249Q2WGJ8 235 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
SREBF1-201ENST00000261646 IGHV1-18A0A0C4DH31 117 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 M0R381 172 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 IGKCP01834 107 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 Q6ZSR3 168 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 AMN1Q8IY45 258 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 MALRD1Q5VYJ5 2156 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 LOC105371242A0A075B767 164 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 SMAD7O15105 426 aaKnown RBP13.19□□□□□ -0.3
SREBF1-201ENST00000261646 PPIAL4GP0DN37 164 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 Q6ZPA2 131 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-201ENST00000261646 FTH1P19P0C7X4 201 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 FAM71F2Q6NXP2 309 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 TMEM14BQ9NUH8 114 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 KIAA1549LQ6ZVL6 1849 aa13.19□□□□□ -0.3
SREBF1-201ENST00000261646 IGHV3-66A0A0C4DH42 116 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 SMKR1H3BMG3 65 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 DLX6P56179 175 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-201ENST00000261646 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
SREBF1-201ENST00000261646 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 SS18L1O75177 396 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-201ENST00000261646 HTN1P15515 57 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 ZC2HC1BQ5TFG8 222 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 ADAMTSL5Q6ZMM2 481 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
SREBF1-201ENST00000261646 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-201ENST00000261646 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 FOXC1Q12948 553 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 ZGRF1Q86YA3 2104 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 NXT2Q9NPJ8 142 aaKnown RBP13.17□□□□□ -0.3
SREBF1-201ENST00000261646 TOMM40O96008 361 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 CKS1BP61024 79 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRR20EP86478 221 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRR20CP86479 221 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRR20DP86480 221 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRR20BP86481 221 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 PRR20AP86496 221 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 FABP5P3A8MUU1 101 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 COX8AP10176 69 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 FAM231DQ6ZW35 169 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 DEFB125Q8N687 156 aa13.17□□□□□ -0.3
SREBF1-201ENST00000261646 SLC25A39Q9BZJ4 359 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-201ENST00000261646 H3BRM9 83 aa13.16□□□□□ -0.3
SREBF1-201ENST00000261646 CFHR2P36980 270 aa13.16□□□□□ -0.3
SREBF1-201ENST00000261646 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
SREBF1-201ENST00000261646 XIRP2A4UGR9 3374 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 SAP30O75446 220 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 PPBPP02775 128 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 LGALS3P17931 250 aaKnown RBP13.15□□□□□ -0.3
SREBF1-201ENST00000261646 ZNF134P52741 427 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 CCDC144NLQ6NUI1 221 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 LINC00173Q6ZV60 143 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 C21orf62Q9NYP8 219 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 F2RL2O00254 374 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 SNCGO76070 127 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 ETDBQ3ZM63 59 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 TMEM167AQ8TBQ9 72 aa13.15□□□□□ -0.3
SREBF1-201ENST00000261646 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-201ENST00000261646 COX6CP09669 75 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 ZNF256Q9Y2P7 627 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-201ENST00000261646 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 ZC2HC1AQ96GY0 325 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 METTL26Q96S19 204 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 SLC25A2Q9BXI2 301 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
SREBF1-201ENST00000261646 IGKV2-40A0A087WW87 121 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-201ENST00000261646 IGKV2D-40P01614 121 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-201ENST00000261646 Q86TA4 180 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 RNFT1Q5M7Z0 435 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 OR10J6PQ8NGY7 276 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 TRGV9Q99603 122 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-201ENST00000261646 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 H0YJW9 148 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 IGHV1-46P01743 117 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
SREBF1-201ENST00000261646 RNF138Q8WVD3 245 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 C17orf100A8MU93 164 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 Q6ZR03 302 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 Q8TAT8 98 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 TRIOO75962 3097 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms