RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 TMEM256Q8N2U0 113 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 CACNA1HO95180 2353 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 A0A087X0M5 115 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 A0A1B0GX30 115 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 SMIM6P0DI80 62 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 DNAJC13O75165 2243 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 FABP4P15090 132 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 FBLN7Q53RD9 439 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 PDZD11Q5EBL8 140 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 MEGF9Q9H1U4 602 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 LIME1Q9H400 295 aa7.32□□□□□ -1.24
PDE6A-201ENST00000255266 HEATR1Q9H583 2144 aaKnown RBP7.32□□□□□ -1.24
PDE6A-201ENST00000255266 RHODO00212 210 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
PDE6A-201ENST00000255266 CCL20P78556 96 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 TOMM20LQ6UXN7 152 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 FOXI2Q6ZQN5 318 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 RNF144BQ7Z419 303 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 IGKV1-6A0A0C4DH72 117 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 PYYP10082 97 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 MGST2Q99735 147 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 TRAV12-3A0A0B4J271 114 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 FHITP49789 147 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 AURKAIP1Q9NWT8 199 aaPredicted RBP7.31□□□□□ -1.24
PDE6A-201ENST00000255266 LGALS3P17931 250 aaKnown RBP7.31□□□□□ -1.24
PDE6A-201ENST00000255266 SPRNQ5BIV9 151 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 MRAPQ8TCY5 172 aa7.31□□□□□ -1.24
PDE6A-201ENST00000255266 C7orf77A4D0Y5 90 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 M0R3E3 92 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 MMP23AO75900 390 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 RNASE1P07998 156 aaKnown RBP7.3□□□□□ -1.24
PDE6A-201ENST00000255266 PPIFP30405 207 aaKnown RBP7.3□□□□□ -1.24
PDE6A-201ENST00000255266 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
PDE6A-201ENST00000255266 IQCJQ1A5X6 159 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 RNF152Q8N8N0 203 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 COL4A2P08572 1712 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 F5H768 121 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 CIDEAO60543 219 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 IGHG2P01859 326 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 PPBPP02775 128 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 VAMP8Q9BV40 100 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 COL6A6A6NMZ7 2263 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 FXYD7P58549 80 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 GNG5P63218 68 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 FAM24BQ8N5W8 94 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 OR10AG1Q8NH19 301 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 PRELID3AQ96N28 172 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 ZNF581Q9P0T4 197 aa7.3□□□□□ -1.24
PDE6A-201ENST00000255266 IGKV2-40A0A087WW87 121 aaPredicted RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 GRIFINA4D1Z8 144 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 IGKV2D-40P01614 121 aaPredicted RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 STAG3L2P0CL84 134 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 STAG3L3P0CL85 134 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 HAPLN4Q86UW8 402 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 ZNF114Q8NC26 417 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 C1orf147Q96MC9 270 aaPredicted RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 FOLR2P14207 255 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 SNRPEP62304 92 aaKnown RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 LY6G5BQ8NDX9 201 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 IL36BQ9NZH7 164 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 C7orf71A4D174 169 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 ATP5LO75964 103 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 WISP2O76076 250 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 IFITM3Q01628 133 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 Q8N7P7 452 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 IGFBPL1Q8WX77 278 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 SPXQ9BT56 116 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 TMEM160Q9NX00 188 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 TPRP12270 2363 aaKnown RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 MEIG1Q5JSS6 88 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 SDHCQ99643 169 aaPredicted RBP7.29□□□□□ -1.24
PDE6A-201ENST00000255266 RNF224P0DH78 156 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 TMEM70Q9BUB7 260 aa7.29□□□□□ -1.24
PDE6A-201ENST00000255266 LINC00862A6NCI5 91 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 IZUMO1RA6ND01 250 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 ZNF134P52741 427 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 IFITM2Q01629 132 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 HIST2H2BCQ6DN03 193 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
PDE6A-201ENST00000255266 TMEM14CQ9P0S9 112 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 IGHV7-81A0A0B4J1V7 117 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 H3BRN7 92 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 SRIP30626 198 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 THAP8Q8NA92 274 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 MBD3L1Q8WWY6 194 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 XCL2Q9UBD3 114 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 TCRAP04437 139 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 K7EMT4 169 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 CDKN1BP46527 198 aa7.28□□□□□ -1.24
PDE6A-201ENST00000255266 ATP5G3P48201 142 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms