RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DEFB4AO15263 64 aa16.68■□□□□ 0.26
LSM4-201ENST00000252816 S100A7P31151 101 aa16.68■□□□□ 0.26
LSM4-201ENST00000252816 GPR82Q96P67 336 aa16.68■□□□□ 0.26
LSM4-201ENST00000252816 SAV1Q9H4B6 383 aaPredicted RBP16.68■□□□□ 0.26
LSM4-201ENST00000252816 PLECQ15149 4684 aaKnown RBP16.67■□□□□ 0.26
LSM4-201ENST00000252816 RYR2Q92736 4967 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 GOSR2O14653 212 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 PRAF2O60831 178 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 MEOX2P50222 304 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 FOXI2Q6ZQN5 318 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 ZNF546Q86UE3 836 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 TMEM252Q8N6L7 170 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 C16orf92Q96LL3 132 aa16.67■□□□□ 0.26
LSM4-201ENST00000252816 ZNF705EA8MWA4 302 aaPredicted RBP16.66■□□□□ 0.26
LSM4-201ENST00000252816 F6UB75 175 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 IGKV3-20P01619 116 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 DEFA1P59665 94 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 DEFA3P59666 94 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 SAMD13Q5VXD3 122 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 Q8NAQ8 132 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 ARV1Q9H2C2 271 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 XCL2Q9UBD3 114 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 X6R8D5 127 aa16.66■□□□□ 0.26
LSM4-201ENST00000252816 SULT1A1P50225 295 aa16.65■□□□□ 0.26
LSM4-201ENST00000252816 IGFL4Q6B9Z1 124 aa16.65■□□□□ 0.26
LSM4-201ENST00000252816 UQCC1Q9NVA1 299 aa16.65■□□□□ 0.26
LSM4-201ENST00000252816 DNAH1Q9P2D7 4330 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 TRAV8-2A0A0B4J237 113 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 RBMY1A1P0DJD3 496 aaKnown RBP16.64■□□□□ 0.25
LSM4-201ENST00000252816 RBMY1CP0DJD4 496 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 RPL7P18124 248 aaKnown RBP16.64■□□□□ 0.25
LSM4-201ENST00000252816 NUTF2P61970 127 aaKnown RBP16.64■□□□□ 0.25
LSM4-201ENST00000252816 RBMY1FQ15415 496 aaKnown RBP16.64■□□□□ 0.25
LSM4-201ENST00000252816 VWC2Q2TAL6 325 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 PXDC1Q5TGL8 231 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 WDR83OSQ9Y284 106 aa16.64■□□□□ 0.25
LSM4-201ENST00000252816 IGHV4-28A0A0C4DH34 117 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 CAMLGP49069 296 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 FXYD7P58549 80 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 NANOS2P60321 138 aaKnown RBP16.63■□□□□ 0.25
LSM4-201ENST00000252816 FGL1Q08830 312 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 STX12Q86Y82 276 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 OR4B1Q8NGF8 309 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 TMEM37Q8WXS4 190 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 NMES1Q9C002 83 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 RPRMQ9NS64 109 aa16.63■□□□□ 0.25
LSM4-201ENST00000252816 A0A0J9YX75 114 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 NUPR2A6NF83 97 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 S100A11P31949 105 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 H2BFSP57053 126 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 FAM78BQ5VT40 261 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 CEMP1Q6PRD7 247 aaPredicted RBP16.62■□□□□ 0.25
LSM4-201ENST00000252816 ZNF709Q8N972 641 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 CLUHP3Q96NS8 147 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 C1QTNF4Q9BXJ3 329 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 OR5AC2Q9NZP5 309 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 ALMS1Q8TCU4 4167 aa16.62■□□□□ 0.25
LSM4-201ENST00000252816 UBE2L5PA0A1B0GUS4 154 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 H0YIZ8 118 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 MRPS12O15235 138 aaKnown RBP16.61■□□□□ 0.25
LSM4-201ENST00000252816 MIFP14174 115 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 LRRC37A5PQ49AS3 106 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 MORN5Q5VZ52 161 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 SPATA31B1PQ5VZV4 182 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 MIC13Q5XKP0 118 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 EBLN2Q6P2I7 272 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 LINC00305Q7Z4B0 112 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 S100A7AQ86SG5 101 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 RNF182Q8N6D2 247 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 C11orf45Q8TAV5 145 aa16.61■□□□□ 0.25
LSM4-201ENST00000252816 A0A087X0K7 114 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 COX7A2P2O60397 106 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 HBG1P69891 147 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 HBG2P69892 147 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PRR20EP86478 221 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PRR20CP86479 221 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PRR20DP86480 221 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PRR20BP86481 221 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PRR20AP86496 221 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 RAB31Q13636 194 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 PHLDA1Q8WV24 401 aaPredicted RBP16.6■□□□□ 0.25
LSM4-201ENST00000252816 SLC35B3Q9H1N7 401 aa16.6■□□□□ 0.25
LSM4-201ENST00000252816 JTBO76095 146 aa16.59■□□□□ 0.25
LSM4-201ENST00000252816 NHLH2Q02577 135 aa16.59■□□□□ 0.25
LSM4-201ENST00000252816 ELOA3CA0A087WX78 387 aaPredicted RBP16.58■□□□□ 0.24
LSM4-201ENST00000252816 A8MTW9 85 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 SSNA1O43805 119 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 RLN2P04090 185 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 HLA-DMBP28068 263 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 PSG9Q00887 426 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 BAXQ07812 192 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 OPCMLQ14982 345 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 C10orf113Q5VZT2 155 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 DNAJC4Q9NNZ3 241 aa16.58■□□□□ 0.24
LSM4-201ENST00000252816 E5RGE8 158 aa16.57■□□□□ 0.24
LSM4-201ENST00000252816 FGF7P21781 194 aa16.57■□□□□ 0.24
LSM4-201ENST00000252816 CYCSP99999 105 aaKnown RBP16.57■□□□□ 0.24
LSM4-201ENST00000252816 ATP6V1FQ16864 119 aa16.57■□□□□ 0.24
LSM4-201ENST00000252816 AMTNQ6UX39 209 aa16.57■□□□□ 0.24
LSM4-201ENST00000252816 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms