RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CA1P00915 261 aaPredicted RBP17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 BAXQ07812 192 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 Q6ZRG5 221 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 RSG1Q9BU20 258 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 SCRT1Q9BWW7 348 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 OR5AC2Q9NZP5 309 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 ALG5Q9Y673 324 aa17.87■□□□□ 0.45
SDF2L1-201ENST00000248958 LYL1P12980 280 aa17.86■□□□□ 0.45
SDF2L1-201ENST00000248958 EWSR1Q01844 656 aaKnown RBP eCLIP17.86■□□□□ 0.45
SDF2L1-201ENST00000248958 CHAC2Q8WUX2 184 aa17.86■□□□□ 0.45
SDF2L1-201ENST00000248958 UBE2L5PA0A1B0GUS4 154 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 H0YIZ8 118 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 NUTF2P61970 127 aaKnown RBP17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 PATE2Q6UY27 113 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 C16orf92Q96LL3 132 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 LINC00052Q96N35 136 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 UHRF2Q96PU4 802 aa17.85■□□□□ 0.45
SDF2L1-201ENST00000248958 AGRNO00468 2067 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 COX7A2P2O60397 106 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 MPC2O95563 127 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 HLA-DRB4P13762 266 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 ATF4P18848 351 aaPredicted RBP17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 RPL29P47914 159 aaKnown RBP17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 PRR20EP86478 221 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 PRR20CP86479 221 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 PRR20DP86480 221 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 PRR20BP86481 221 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 PRR20AP86496 221 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 NHLH2Q02577 135 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 SPATA31B1PQ5VZV4 182 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 OR1L4Q8NGR5 311 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 HLA-DRB4X5D2U9 266 aa17.84■□□□□ 0.45
SDF2L1-201ENST00000248958 OPCMLQ14982 345 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 FOXI2Q6ZQN5 318 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 LINC00305Q7Z4B0 112 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 OR5C1Q8NGR4 320 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 PFDN5Q99471 154 aa17.83■□□□□ 0.44
SDF2L1-201ENST00000248958 H3BMM0 161 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 FGF7P21781 194 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 CASC10Q5T4H9 136 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 C10orf113Q5VZT2 155 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 RARRES2Q99969 163 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 RNF126Q9BV68 326 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 SAV1Q9H4B6 383 aaPredicted RBP17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 DNAJC4Q9NNZ3 241 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 RPRMQ9NS64 109 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 RYR3Q15413 4870 aa17.82■□□□□ 0.44
SDF2L1-201ENST00000248958 A0A087X0K7 114 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 B2MP61769 119 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 MIC13Q5XKP0 118 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 TMEM37Q8WXS4 190 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 CLUHP3Q96NS8 147 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 C1QTNF4Q9BXJ3 329 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 MED28Q9H204 178 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 SLC39A9Q9NUM3 307 aa17.81■□□□□ 0.44
SDF2L1-201ENST00000248958 RGS21Q2M5E4 152 aa17.8■□□□□ 0.44
SDF2L1-201ENST00000248958 EBLN2Q6P2I7 272 aa17.8■□□□□ 0.44
SDF2L1-201ENST00000248958 C17orf77Q96MU5 243 aa17.8■□□□□ 0.44
SDF2L1-201ENST00000248958 FGL1Q08830 312 aa17.79■□□□□ 0.44
SDF2L1-201ENST00000248958 BPIFA4PQ86YQ2 179 aa17.79■□□□□ 0.44
SDF2L1-201ENST00000248958 OR11H2Q8NH07 326 aa17.79■□□□□ 0.44
SDF2L1-201ENST00000248958 PXMP4Q9Y6I8 212 aa17.79■□□□□ 0.44
SDF2L1-201ENST00000248958 GIG44P09565 113 aaPredicted RBP17.78■□□□□ 0.44
SDF2L1-201ENST00000248958 CXCL2P19875 107 aa17.78■□□□□ 0.44
SDF2L1-201ENST00000248958 NPCDR1Q9BY65 106 aa17.78■□□□□ 0.44
SDF2L1-201ENST00000248958 KCNIP2Q9NS61 270 aa17.78■□□□□ 0.44
SDF2L1-201ENST00000248958 A0A0J9YWU9 116 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 CXCL3P19876 107 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 C4BPBP20851 252 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 RPL12P30050 165 aaKnown RBP17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 THAP6Q8TBB0 222 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 ASB13Q8WXK3 278 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 MBD2Q9UBB5 411 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 HSPB11Q9Y547 144 aa17.77■□□□□ 0.44
SDF2L1-201ENST00000248958 MRPS12O15235 138 aaKnown RBP17.76■□□□□ 0.43
SDF2L1-201ENST00000248958 CLINT1Q14677 625 aa17.76■□□□□ 0.43
SDF2L1-201ENST00000248958 GDF5OSQ5U4N7 250 aa17.76■□□□□ 0.43
SDF2L1-201ENST00000248958 LRRC20Q8TCA0 184 aa17.76■□□□□ 0.43
SDF2L1-201ENST00000248958 FCN2Q15485 313 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 ZFAND6Q6FIF0 208 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 LCN15Q6UWW0 184 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 ZNF709Q8N972 641 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 C20orf173Q96LM9 149 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 ATP5SQ99766 215 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 SLC50A1Q9BRV3 221 aa17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 WDR61Q9GZS3 305 aaKnown RBP17.75■□□□□ 0.43
SDF2L1-201ENST00000248958 TRAV8-2A0A0B4J237 113 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 A0A0J9YX75 114 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 C17orf112F2Z3M2 114 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 CSNK1G2-AS1Q8NCQ2 148 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 OR11H7Q8NGC8 314 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 OR4B1Q8NGF8 309 aa17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 C11orf68Q9H3H3 251 aaKnown RBP17.74■□□□□ 0.43
SDF2L1-201ENST00000248958 DUSP14O95147 198 aaKnown RBP17.73■□□□□ 0.43
SDF2L1-201ENST00000248958 ZNF705EA8MWA4 302 aaPredicted RBP17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 DEFB1P60022 68 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 PSG9Q00887 426 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 OXA1LQ15070 435 aa17.72■□□□□ 0.43
SDF2L1-201ENST00000248958 GUK1Q16774 197 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms