RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SYNJ2BPP57105 145 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 KLHDC3Q9BQ90 382 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 TRAV25A0A0B4J276 109 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 CECR9P0C854 216 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 JPT1Q9UK76 154 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 SBF2Q86WG5 1849 aa9.21□□□□□ -0.94
MSH6-201ENST00000234420 IGLV3-16A0A075B6K0 115 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 C17orf98A8MV24 154 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
MSH6-201ENST00000234420 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 INAFM2P0DMQ5 153 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 C5orf67F2Z3F1 127 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 H3BMG7 143 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 IGHV1-2P23083 117 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 DUX4L9Q6RFH8 374 aaPredicted RBP9.2□□□□□ -0.94
MSH6-201ENST00000234420 C15orf53Q8NAA6 179 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 WFDC6Q9BQY6 131 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 TMEM242Q9NWH2 141 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 DUTP33316 252 aaKnown RBP9.2□□□□□ -0.94
MSH6-201ENST00000234420 UBE2BP63146 152 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 LRP5O75197 1615 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 RPL15P61313 204 aaKnown RBP9.2□□□□□ -0.94
MSH6-201ENST00000234420 SPXQ9BT56 116 aa9.2□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A10PA6NDY2 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A18PA6NE21 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A16PA6NEW6 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A20PA6NIJ5 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A8PA6NJQ4 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A7PA6NKC0 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A22PA8MWA6 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A12PA8MX19 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A5PA8MXJ8 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A23PA8MXZ1 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A15PP0C7V4 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A13PP0C7W8 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A14PP0C7W9 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FAM90A24PP0C7X0 464 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 RPRMLQ8N4K4 120 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 CACNG8Q8WXS5 425 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 TMEM54Q969K7 222 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 VSIRQ9H7M9 311 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 ZNF319Q9P2F9 582 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 BMPERQ8N8U9 685 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 A0A1W2PPI3 338 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 CT83Q5H943 113 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 MED13Q9UHV7 2174 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 TCRAP04437 139 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 LIMS1P48059 325 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 K7EP34 96 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 FBLIM1Q8WUP2 373 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 TMEM158Q8WZ71 300 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
MSH6-201ENST00000234420 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 CDKN1BP46527 198 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 RPL34P49207 117 aaKnown RBP9.18□□□□□ -0.94
MSH6-201ENST00000234420 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
MSH6-201ENST00000234420 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 MRPL55Q7Z7F7 128 aaKnown RBP9.18□□□□□ -0.94
MSH6-201ENST00000234420 WFDC1Q9HC57 220 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 A0A1W2PPV9 198 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 TMEM14DPA8MWL7 114 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 PTGDSP41222 190 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 FGF16O43320 207 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 GLI3P10071 1580 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 IGKV1OR2-108A0A075B7D4 117 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 SLC25A39Q9BZJ4 359 aaPredicted RBP9.18□□□□□ -0.94
MSH6-201ENST00000234420 LHFPL6Q9Y693 200 aa9.18□□□□□ -0.94
MSH6-201ENST00000234420 A0A1B0GWJ7 208 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 F8VVB4 439 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 F8VWA3 439 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 FGF6P10767 208 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 TMEM243Q9BU79 118 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 EML6Q6ZMW3 1958 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 MED12LQ86YW9 2145 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 SMKR1H3BMG3 65 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 IGHG3P01860 377 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 PAX8Q06710 450 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.17□□□□□ -0.94
MSH6-201ENST00000234420 COL11A2P13942 1736 aaPredicted RBP9.17□□□□□ -0.94
MSH6-201ENST00000234420 FOXS1O43638 330 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 EFNA2O43921 213 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 TEX43Q6ZNM6 134 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 A0A1B0GUS0 222 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 J3KT08 172 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 IGHV2-70P01814 119 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 ZNF876PQ49A33 203 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 LTBP4Q8N2S1 1624 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 DLEC1Q9Y238 1755 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 F2Z2F3 143 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 IMMP1LQ96LU5 166 aa9.17□□□□□ -0.94
MSH6-201ENST00000234420 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms