RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 FAM222BQ8WU58 562 aa7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 SLC25A33Q9BSK2 321 aa7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 FAM215AQ9Y5M1 114 aa7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 LRBAP50851 2863 aa7.58□□□□□ -1.2
HLA-DOA-201ENST00000229829 RIF1Q5UIP0 2472 aaKnown RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 IGLV3-9A0A075B6K5 115 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 CCL3L1P16619 93 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 SLC25A48Q6ZT89 311 aaKnown RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 FA2HQ7L5A8 372 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 ADTRPQ96IZ2 230 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 MRPL20Q9BYC9 149 aaKnown RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 ZNF257Q9Y2Q1 563 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 A1L4Q6 167 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 MBD3L4A6NDZ8 208 aaPredicted RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 MBD3L3A6NE82 208 aaPredicted RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 MBD3L5A6NJ08 208 aaPredicted RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 FCN3O75636 299 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 TIMM23BQ5SRD1 257 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 MBD3L2Q8NHZ7 208 aaPredicted RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 ASCL2Q99929 193 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 RPUSD1Q9UJJ7 312 aaKnown RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 SVEP1Q4LDE5 3571 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 DCHS2Q6V1P9 2916 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 SLC25A17O43808 307 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 CD69Q07108 199 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 ANXA2RQ3ZCQ2 193 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 FAM167A-AS1Q96KT0 104 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 IGF2BP2-AS1Q96M15 143 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
HLA-DOA-201ENST00000229829 C8orf88P0DMB2 117 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 C2orf83Q53S99 150 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 RUSC1-AS1Q66K80 236 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 SLC25A2Q9BXI2 301 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 NHP2Q9NX24 153 aaKnown RBP7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 MRPL36Q9P0J6 103 aaKnown RBP7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 AMMECR1Q9Y4X0 333 aaPredicted RBP7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 FCGR2BP31994 310 aaPredicted RBP7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 GATA4P43694 442 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 SEC11AP67812 179 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 WFDC2Q14508 124 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 ARPC1AQ92747 370 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 HARBI1Q96MB7 349 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 SCRT2Q9NQ03 307 aa7.56□□□□□ -1.2
HLA-DOA-201ENST00000229829 CNIH1O95406 144 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 APOHP02749 345 aaPredicted RBP7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 SLC25A5P05141 298 aaKnown RBP7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 NEU4Q8WWR8 484 aaPredicted RBP7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 FLYWCH2Q96CP2 140 aaKnown RBP7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 C18orf15Q96N68 181 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 ZNF292O60281 2723 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 ACACAQ13085 2346 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 A8MWL6 223 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 FNDC10F2Z333 226 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 LIPFP07098 398 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 FTH1P19P0C7X4 201 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 WT1-ASQ06250 92 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 PATE2Q6UY27 113 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 CUL9Q8IWT3 2517 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 CGB1A6NKQ9 187 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 K7EM74 188 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 REG1AP05451 166 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 CACNG7P62955 275 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 HBBP68871 147 aa7.55□□□□□ -1.2
HLA-DOA-201ENST00000229829 A0A1W2PPM0 123 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 NCR2O95944 276 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 TAS2R45P59539 299 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 OR1L8Q8NGR8 309 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 NPIPB3Q92617 1050 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 RITA1Q96K30 269 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 TMSB15BA0A087X1C1 80 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 APELAP0DMC3 54 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 PCP2Q8IVA1 136 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 LINC00574Q9H8X3 128 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 AP5S1Q9NUS5 200 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 ZNF833PQ6ZTB9 187 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 C1RLQ9NZP8 487 aa7.54□□□□□ -1.2
HLA-DOA-201ENST00000229829 AKAP6Q13023 2319 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 A0A1B0GWB2 263 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 H3BMG7 143 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 P01737 135 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 COX8AP10176 69 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 CD40P25942 277 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 RALYQ9UKM9 306 aaKnown RBP7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 IGKV1D-37A0A075B6S9 117 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 A0A1W2PRD5 423 aa7.53□□□□□ -1.2
HLA-DOA-201ENST00000229829 A0A1W2PRF3 423 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms