RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 MIC13Q5XKP0 118 aa13.4□□□□□ -0.26
PFN1-201ENST00000225655 RNF2Q99496 336 aa13.4□□□□□ -0.26
PFN1-201ENST00000225655 SPAG8Q99932 426 aaPredicted RBP13.4□□□□□ -0.26
PFN1-201ENST00000225655 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PFDN1O60925 122 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 JTBO76095 146 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 C1QBP02746 253 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PRR20EP86478 221 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PRR20CP86479 221 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PRR20DP86480 221 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PRR20BP86481 221 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 PRR20AP86496 221 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 C10orf113Q5VZT2 155 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 TMEM182Q6ZP80 229 aaPredicted RBP13.39□□□□□ -0.27
PFN1-201ENST00000225655 TCF24Q7RTU0 167 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 HYLS1Q96M11 299 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 GPR82Q96P67 336 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 ARV1Q9H2C2 271 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 U3KQE9 123 aa13.39□□□□□ -0.27
PFN1-201ENST00000225655 LOC102724200A0A096LPH7 203 aaPredicted RBP13.38□□□□□ -0.27
PFN1-201ENST00000225655 OR4C46A6NHA9 309 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 TSPAN4O14817 238 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 BUB3O43684 328 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
PFN1-201ENST00000225655 ZFP69Q49AA0 526 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 C16orf54Q6UWD8 224 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 KCNRGQ8N5I3 272 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 GNPNAT1Q96EK6 184 aaPredicted RBP13.38□□□□□ -0.27
PFN1-201ENST00000225655 ARPC5LQ9BPX5 153 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 WFDC1Q9HC57 220 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
PFN1-201ENST00000225655 DNASE2O00115 360 aaPredicted RBP13.37□□□□□ -0.27
PFN1-201ENST00000225655 C4BPBP20851 252 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 GALR1P47211 349 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 EIF5AP63241 154 aaKnown RBP13.37□□□□□ -0.27
PFN1-201ENST00000225655 SIGLEC15Q6ZMC9 328 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 OR11H4Q8NGC9 324 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 GATAD1Q8WUU5 269 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 SHANK2-AS3Q9BTD1 123 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 SLC25A39Q9BZJ4 359 aaPredicted RBP13.37□□□□□ -0.27
PFN1-201ENST00000225655 SLC25A22Q9H936 323 aa13.37□□□□□ -0.27
PFN1-201ENST00000225655 ZNF98A6NK75 572 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 HSD17B11Q8NBQ5 300 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 OVOL2Q9BRP0 275 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 RSG1Q9BU20 258 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 RYR2Q92736 4967 aa13.36□□□□□ -0.27
PFN1-201ENST00000225655 H3BRN7 92 aa13.35□□□□□ -0.27
PFN1-201ENST00000225655 BCL2L11O43521 198 aa13.35□□□□□ -0.27
PFN1-201ENST00000225655 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
PFN1-201ENST00000225655 CMC4P56277 68 aaPredicted RBP13.35□□□□□ -0.27
PFN1-201ENST00000225655 ACOT6Q3I5F7 207 aaPredicted RBP13.35□□□□□ -0.27
PFN1-201ENST00000225655 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
PFN1-201ENST00000225655 SAMD13Q5VXD3 122 aa13.35□□□□□ -0.27
PFN1-201ENST00000225655 RPL7L1Q6DKI1 246 aaKnown RBP13.35□□□□□ -0.27
PFN1-201ENST00000225655 STXBP6Q8NFX7 210 aa13.35□□□□□ -0.27
PFN1-201ENST00000225655 PSMG3Q9BT73 122 aaPredicted RBP13.35□□□□□ -0.27
PFN1-201ENST00000225655 STARD9Q9P2P6 4700 aa13.34□□□□□ -0.27
PFN1-201ENST00000225655 IGKV3-7A0A075B6H7 116 aa13.34□□□□□ -0.27
PFN1-201ENST00000225655 TRAV2A0A0B4J234 112 aa13.34□□□□□ -0.27
PFN1-201ENST00000225655 UHRF2Q96PU4 802 aa13.34□□□□□ -0.27
PFN1-201ENST00000225655 SCRT1Q9BWW7 348 aa13.34□□□□□ -0.27
PFN1-201ENST00000225655 MBP02144 154 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 ATF4P18848 351 aaPredicted RBP13.33□□□□□ -0.28
PFN1-201ENST00000225655 MEOX2P50222 304 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 APOC4P55056 127 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 SERF2P84101 59 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 TMUB2Q71RG4 321 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 TMEM37Q8WXS4 190 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
PFN1-201ENST00000225655 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
PFN1-201ENST00000225655 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
PFN1-201ENST00000225655 SACSQ9NZJ4 4579 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 CXCL2P19875 107 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 ATP6V0CP27449 155 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 TFPI2P48307 235 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 RHOBP62745 196 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 ODF3L2Q3SX64 289 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 Q6ZWC4 215 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 GBGT1Q8N5D6 347 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 OR2G3Q8NGZ4 309 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 SLC25A32Q9H2D1 315 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 UBQLN2Q9UHD9 624 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 TP53TG1Q9Y2A0 90 aa13.32□□□□□ -0.28
PFN1-201ENST00000225655 M6PRP20645 277 aa13.31□□□□□ -0.28
PFN1-201ENST00000225655 FAM78BQ5VT40 261 aa13.31□□□□□ -0.28
PFN1-201ENST00000225655 LEMD1Q68G75 181 aa13.31□□□□□ -0.28
PFN1-201ENST00000225655 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
PFN1-201ENST00000225655 KIR2DL5BA0A0G2JN68 375 aa13.3□□□□□ -0.28
PFN1-201ENST00000225655 KIR2DL5BA0A0G2JPC4 375 aa13.3□□□□□ -0.28
PFN1-201ENST00000225655 A0A1W2PPV4 95 aa13.3□□□□□ -0.28
PFN1-201ENST00000225655 UBE2CO00762 179 aa13.3□□□□□ -0.28
PFN1-201ENST00000225655 ID1P41134 155 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms