RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 THAP6Q8TBB0 222 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 LINC00052Q96N35 136 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 MED28Q9H204 178 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 ARV1Q9H2C2 271 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 MBD2Q9UBB5 411 aa9.32□□□□□ -0.92
LSM5-201ENST00000223084 UBE2CO00762 179 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 SPRY2O43597 315 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 S100A7P31151 101 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 RAB31Q13636 194 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 CLINT1Q14677 625 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
LSM5-201ENST00000223084 EDA2RQ9HAV5 297 aa9.31□□□□□ -0.92
LSM5-201ENST00000223084 COX7A2P2O60397 106 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 CA1P00915 261 aaPredicted RBP9.3□□□□□ -0.92
LSM5-201ENST00000223084 PET100P0DJ07 73 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 ID1P41134 155 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PRR20EP86478 221 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PRR20CP86479 221 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PRR20DP86480 221 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PRR20BP86481 221 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PRR20AP86496 221 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 FGL1Q08830 312 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 OPCMLQ14982 345 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 PXDC1Q5TGL8 231 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 MORN5Q5VZ52 161 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 Q6ZWC4 215 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 LINC00305Q7Z4B0 112 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 TMEM37Q8WXS4 190 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 RNF183Q96D59 192 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 C20orf173Q96LM9 149 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 SEPSECSQ9HD40 501 aaKnown RBP9.3□□□□□ -0.92
LSM5-201ENST00000223084 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
LSM5-201ENST00000223084 GIG44P09565 113 aaPredicted RBP9.29□□□□□ -0.92
LSM5-201ENST00000223084 RPL29P47914 159 aaKnown RBP9.29□□□□□ -0.92
LSM5-201ENST00000223084 PSMB3P49720 205 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 B2MP61769 119 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 GDF5OSQ5U4N7 250 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 Q6ZRG5 221 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 GPR82Q96P67 336 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 SMIM3Q9BZL3 60 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 DNAJC4Q9NNZ3 241 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 HSPB11Q9Y547 144 aa9.29□□□□□ -0.92
LSM5-201ENST00000223084 DNAH7Q8WXX0 4024 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 TRAV5A0A0B4J249 113 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 F6UB75 175 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 H3BMM0 161 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 ISLRO14498 428 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
LSM5-201ENST00000223084 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
LSM5-201ENST00000223084 RPL7P18124 248 aaKnown RBP9.28□□□□□ -0.92
LSM5-201ENST00000223084 ATF4P18848 351 aaPredicted RBP9.28□□□□□ -0.92
LSM5-201ENST00000223084 C4BPBP20851 252 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 RPL12P30050 165 aaKnown RBP9.28□□□□□ -0.92
LSM5-201ENST00000223084 Q5BKY6 102 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 MUC7Q8TAX7 377 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 CHAC2Q8WUX2 184 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 NPCDR1Q9BY65 106 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 TP53TG1Q9Y2A0 90 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
LSM5-201ENST00000223084 ELOA3CA0A087WX78 387 aaPredicted RBP9.27□□□□□ -0.93
LSM5-201ENST00000223084 TRAV8-2A0A0B4J237 113 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 LYL1P12980 280 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 MEOX2P50222 304 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 GCSAMLQ5JQS6 135 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 S100A7AQ86SG5 101 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 ATP5SQ99766 215 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 WDR61Q9GZS3 305 aaKnown RBP9.27□□□□□ -0.93
LSM5-201ENST00000223084 WFDC1Q9HC57 220 aa9.27□□□□□ -0.93
LSM5-201ENST00000223084 A0A087X0K7 114 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 H3BTX0 84 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 MPDU1O75352 247 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
LSM5-201ENST00000223084 HLA-DRB4P13762 266 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 HLA-DMBP28068 263 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 FXYD7P58549 80 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 ZFAND6Q6FIF0 208 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 Q6ZNX1 250 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 OR1L4Q8NGR5 311 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 SAV1Q9H4B6 383 aaPredicted RBP9.26□□□□□ -0.93
LSM5-201ENST00000223084 CLEC5AQ9NY25 188 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 HLA-DRB4X5D2U9 266 aa9.26□□□□□ -0.93
LSM5-201ENST00000223084 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 SPP1P10451 314 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 SAMD13Q5VXD3 122 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
LSM5-201ENST00000223084 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 OR11H2Q8NH07 326 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 PFDN5Q99471 154 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 RARRES2Q99969 163 aa9.25□□□□□ -0.93
LSM5-201ENST00000223084 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms