RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 PAGE4O60829 102 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 ZP3P21754 424 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 ICAM4Q14773 271 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 OR11H1Q8NG94 326 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 TREM1Q9NP99 234 aa12.2□□□□□ -0.46
SNRPD3-201ENST00000215829 LINC01619G3V211 115 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 K7EMT4 169 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 APOHP02749 345 aaPredicted RBP12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 HOXD3P31249 432 aaPredicted RBP12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 UBE2G2P60604 165 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 FOXL1Q12952 345 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 DEFB136Q30KP8 78 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 OR1N2Q8NGR9 330 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 RXFP4Q8TDU9 374 aa12.19□□□□□ -0.46
SNRPD3-201ENST00000215829 TEP1Q99973 2627 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 C9JQL5 133 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 LGALS9O00182 355 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 RPL7P18124 248 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 C8orf86Q6ZUL3 223 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 DPF1Q92782 380 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 UFC1Q9Y3C8 167 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 ARL2-SNX15V9GYD0 113 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 FAM74A7A6NL05 159 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 NBEAP1P0C6P0 100 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 HIST1H1EP10412 219 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 KLF5Q13887 457 aaPredicted RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 REC114Q7Z4M0 266 aa12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 YTHDF2Q9Y5A9 579 aaKnown RBP12.18□□□□□ -0.46
SNRPD3-201ENST00000215829 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 A0A1W2PRX2 142 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 IGLC2P0DOY2 106 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 SYNJ2BPP57105 145 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 KRTAP10-3P60369 221 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 CST9LP1Q5W188 147 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 ZNF586Q9NXT0 402 aa12.17□□□□□ -0.46
SNRPD3-201ENST00000215829 IGHV3OR16-13A0A075B7E8 117 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 IGHV3-74A0A0B4J1X5 117 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 IGHV3-66A0A0C4DH42 116 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 A0A1W2PS18 150 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 H3BQ15 152 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 CD81P60033 236 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 GPR82Q96P67 336 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 TXNDC17Q9BRA2 123 aa12.16□□□□□ -0.46
SNRPD3-201ENST00000215829 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 A8MWP6 167 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 SLURP1P55000 103 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 DUX3Q96PT4 197 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 JMJD1CQ15652 2540 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 NDUFS6O75380 124 aaKnown RBP12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 ATP5G3P48201 142 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 SMPXQ9UHP9 88 aa12.15□□□□□ -0.46
SNRPD3-201ENST00000215829 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 TMEM213A2RRL7 107 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 CCL24O00175 119 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 FHL3Q13643 280 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 GLMPQ8WWB7 406 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 RHPN1-AS1Q9BWJ2 59 aa12.14□□□□□ -0.47
SNRPD3-201ENST00000215829 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 H3BTX0 84 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 CHEK1O14757 476 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 SFTA3P0C7M3 94 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 S100A1P23297 94 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 GALR1P47211 349 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 CCDC28AQ8IWP9 274 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 C17orf77Q96MU5 243 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 GGTLC3B5MD39 225 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 PDE6DO43924 150 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 NDUFB4O95168 129 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 ATF4P18848 351 aaPredicted RBP12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 SUMO1P63165 101 aaKnown RBP12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 PDE6HQ13956 83 aa12.13□□□□□ -0.47
SNRPD3-201ENST00000215829 AWAT1Q58HT5 328 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms