RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	FAM83A	Q86UY5	434 aa		18.46	■□□□□ 0.55
PHGDH-231	ENST00000641939	SLF2	Q8IX21	1173 aa		18.46	■□□□□ 0.55
PHGDH-231	ENST00000641939	SIRT2	Q8IXJ6	389 aa		18.46	■□□□□ 0.55
PHGDH-231	ENST00000641939	EAF2	Q96CJ1	260 aa	Predicted RBP	18.46	■□□□□ 0.55
PHGDH-231	ENST00000641939	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.46	■□□□□ 0.54
PHGDH-231	ENST00000641939	HSPA8	P11142	646 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	IREB2	P48200	963 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	LBX1	P52954	281 aa		18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	CDC42EP5	Q6NZY7	148 aa		18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	CDAN1	Q8IWY9	1227 aa		18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	PRDM10	Q9NQV6	1147 aa		18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	DBNL	Q9UJU6	430 aa	Known RBP	18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	GAK	O14976	1311 aa		18.45	■□□□□ 0.54
PHGDH-231	ENST00000641939	UNCX	A6NJT0	531 aa		18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	USP2	O75604	605 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	TBC1D9	Q6ZT07	1266 aa		18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	REM2	Q8IYK8	340 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	RHPN1	Q8TCX5	695 aa		18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	FAM163A	Q96GL9	167 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.44	■□□□□ 0.54
PHGDH-231	ENST00000641939	MECOM	Q03112	1051 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	SLC10A4	Q96EP9	437 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	CSRNP1	Q96S65	589 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	SNRK	Q9NRH2	765 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	USP40	Q9NVE5	1235 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	TLR7	Q9NYK1	1049 aa	Known RBP	18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	MROH7-TTC4	A0A0A0MT08	1334 aa		18.43	■□□□□ 0.54
PHGDH-231	ENST00000641939	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	MAST2	Q6P0Q8	1798 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	GSTO1	P78417	241 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	AACS	Q86V21	672 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	FAM151A	Q8WW52	585 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	NSUN4	Q96CB9	384 aa	Known RBP	18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	HOOK2	Q96ED9	719 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	KIF1BP	Q96EK5	621 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	CLMN	Q96JQ2	1002 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	RAI14	Q9P0K7	980 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	LRP2BP	Q9P2M1	347 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	CASP8AP2	Q9UKL3	1982 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	LAMB1	P07942	1786 aa		18.42	■□□□□ 0.54
PHGDH-231	ENST00000641939	RAB11FIP3	O75154	756 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	RRP1	P56182	461 aa	Known RBP	18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	NFIA	Q12857	509 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	ANKRD13A	Q8IZ07	590 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	ZNF384	Q8TF68	577 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	IL1RAPL2	Q9NP60	686 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	TSKS	Q9UJT2	592 aa		18.41	■□□□□ 0.54
PHGDH-231	ENST00000641939	APBB1	O00213	710 aa		18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	LDHC	P07864	332 aa		18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	TCP10	Q12799	353 aa		18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	MKRN3	Q13064	507 aa	Known RBP	18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	SPRYD7	Q5W111	196 aa		18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	CLASRP	Q8N2M8	674 aa	Known RBP	18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	SAGE1	Q9NXZ1	904 aa		18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.4	■□□□□ 0.54
PHGDH-231	ENST00000641939	DOCK2	Q92608	1830 aa		18.39	■□□□□ 0.54
PHGDH-231	ENST00000641939	GPR75-ASB3	A0A0A6YYF3	556 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	CYP2E1	P05181	493 aa	Predicted RBP	18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	BTD	P43251	543 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	ZAP70	P43403	619 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	DCAF15	Q66K64	600 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	WNK4	Q96J92	1243 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	IDI2	Q9BXS1	227 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	RNF186	Q9NXI6	227 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	FAM198A	Q9UFP1	575 aa		18.39	■□□□□ 0.53
PHGDH-231	ENST00000641939	TRPA1	O75762	1119 aa		18.38	■□□□□ 0.53
PHGDH-231	ENST00000641939	ZBTB48	P10074	688 aa	Predicted RBP	18.38	■□□□□ 0.53
PHGDH-231	ENST00000641939	TNS4	Q8IZW8	715 aa		18.38	■□□□□ 0.53
PHGDH-231	ENST00000641939	RFX7	Q2KHR2	1363 aa		18.38	■□□□□ 0.53
PHGDH-231	ENST00000641939	IGSF3	O75054	1194 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	ENTPD3	O75355	529 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	TM4SF4	P48230	202 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	RGS3	P49796	1198 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	MAP3K9	P80192	1104 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	SREBF2	Q12772	1141 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.37	■□□□□ 0.53	3e-8	■■■□□ 15.9
PHGDH-231	ENST00000641939	CSAD	Q9Y600	493 aa		18.37	■□□□□ 0.53
PHGDH-231	ENST00000641939	WDHD1	O75717	1129 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	MAP4K4	O95819	1239 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	IFIT2	P09913	472 aa	Known RBP	18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	RHBDL3	P58872	404 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	VGLL4	Q14135	290 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	NAA16	Q6N069	864 aa	Predicted RBP	18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	ZFPM1	Q8IX07	1006 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	WRNIP1	Q96S55	665 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	CDK5RAP2	Q96SN8	1893 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	ZNF341	Q9BYN7	854 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	ELP3	Q9H9T3	547 aa		18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	PIH1D3	Q9NQM4	214 aa	Known RBP	18.36	■□□□□ 0.53
PHGDH-231	ENST00000641939	MANSC4	A6NHS7	340 aa	Predicted RBP	18.35	■□□□□ 0.53
PHGDH-231	ENST00000641939	INHBE	P58166	350 aa		18.35	■□□□□ 0.53
PHGDH-231	ENST00000641939	MIGA2	Q7L4E1	593 aa		18.35	■□□□□ 0.53
PHGDH-231	ENST00000641939	OPTN	Q96CV9	577 aa		18.35	■□□□□ 0.53
PHGDH-231	ENST00000641939	BCL11A	Q9H165	835 aa		18.35	■□□□□ 0.53
PHGDH-231	ENST00000641939	GJA5	P36382	358 aa		18.34	■□□□□ 0.53
PHGDH-231	ENST00000641939	PICALM	Q13492	652 aa		18.34	■□□□□ 0.53
PHGDH-231	ENST00000641939	NOL10	Q9BSC4	688 aa	Known RBP	18.34	■□□□□ 0.53
PHGDH-231	ENST00000641939	LRRCC1	Q9C099	1032 aa		18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 355.6 ms