RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FKBP1CQ5VVH2 108 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 FAM83AQ86UY5 434 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
PNKP-229ENST00000637897 WDR66Q8TBY9 1149 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 BRI3BPQ8WY22 251 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 OPTNQ96CV9 577 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 SLC10A4Q96EP9 437 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 DDX4Q9NQI0 724 aaKnown RBP9.75□□□□□ -0.85
PNKP-229ENST00000637897 GAKO14976 1311 aa9.75□□□□□ -0.85
PNKP-229ENST00000637897 MYH2Q9UKX2 1941 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 UNCXA6NJT0 531 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 CCDC85CA6NKD9 419 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
PNKP-229ENST00000637897 GNAI2P04899 355 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 INPP5BP32019 993 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 MOGSQ13724 837 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 ANKRD13AQ8IZ07 590 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 SSH3Q8TE77 659 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 ZKSCAN4Q969J2 545 aaPredicted RBP9.74□□□□□ -0.85
PNKP-229ENST00000637897 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
PNKP-229ENST00000637897 RPAP1Q9BWH6 1393 aaPredicted RBP9.74□□□□□ -0.85
PNKP-229ENST00000637897 ZSWIM8A7E2V4 1837 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 MANSC4A6NHS7 340 aaPredicted RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 IPO8O15397 1037 aaKnown RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 WDHD1O75717 1129 aaPredicted RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 KCNA4P22459 653 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 MCAMP43121 646 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 IREB2P48200 963 aaKnown RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 RHBDL3P58872 404 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 TCP10Q12799 353 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 CRHR2Q13324 411 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 TNFAIP1Q13829 316 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 ERICH6BQ5W0A0 696 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 MIGA2Q7L4E1 593 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 CTU1Q7Z7A3 348 aaKnown RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 FAM43AQ8N2R8 423 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 ZNF112Q9UJU3 913 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 DENND2AQ9ULE3 1009 aa9.73□□□□□ -0.85
PNKP-229ENST00000637897 MKI67P46013 3256 aaKnown RBP9.73□□□□□ -0.85
PNKP-229ENST00000637897 TNRC18O15417 2968 aaPredicted RBP9.72□□□□□ -0.85
PNKP-229ENST00000637897 SPDYE5A6NIY4 337 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 SEMA3EO15041 775 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
PNKP-229ENST00000637897 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 SREBF2Q12772 1141 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 FAM151AQ8WW52 585 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 DBNDD2Q9BQY9 259 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 USP40Q9NVE5 1235 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 TLR7Q9NYK1 1049 aaKnown RBP9.72□□□□□ -0.85
PNKP-229ENST00000637897 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
PNKP-229ENST00000637897 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
PNKP-229ENST00000637897 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
PNKP-229ENST00000637897 DDTLA6NHG4 134 aaPredicted RBP9.71□□□□□ -0.86
PNKP-229ENST00000637897 IRF6O14896 467 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.86
PNKP-229ENST00000637897 CTGFP29279 349 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 MECOMQ03112 1051 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 RRP1BQ14684 758 aaKnown RBP9.71□□□□□ -0.86
PNKP-229ENST00000637897 CEP85Q6P2H3 762 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 ADGRA1Q86SQ6 560 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 SIRT2Q8IXJ6 389 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 NSUN4Q96CB9 384 aaKnown RBP9.71□□□□□ -0.86
PNKP-229ENST00000637897 WRNIP1Q96S55 665 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 IDI2Q9BXS1 227 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.86
PNKP-229ENST00000637897 MAST3O60307 1309 aa9.71□□□□□ -0.86
PNKP-229ENST00000637897 SIPA1L1O43166 1804 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 GPR75-ASB3A0A0A6YYF3 556 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 FKTNO75072 461 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 TNNI2P48788 182 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 RGS3P49796 1198 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 SOX10P56693 466 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 INHBEP58166 350 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
PNKP-229ENST00000637897 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 EAF2Q96CJ1 260 aaPredicted RBP9.7□□□□□ -0.86
PNKP-229ENST00000637897 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 NEUROD6Q96NK8 337 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 DBNLQ9UJU6 430 aaKnown RBP9.7□□□□□ -0.86
PNKP-229ENST00000637897 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 PHIPQ8WWQ0 1821 aa9.7□□□□□ -0.86
PNKP-229ENST00000637897 MROH7-TTC4A0A0A0MT08 1334 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 CCL15-CCL14A0A0B4J2E2 113 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 BTBD19C9JJ37 291 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 CYP2E1P05181 493 aaPredicted RBP9.69□□□□□ -0.86
PNKP-229ENST00000637897 BTDP43251 543 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 KIAA0100Q14667 2235 aaKnown RBP9.69□□□□□ -0.86
PNKP-229ENST00000637897 CCL15Q16663 113 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 OTOP1Q7RTM1 612 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
PNKP-229ENST00000637897 SPATA5Q8NB90 893 aa9.69□□□□□ -0.86
PNKP-229ENST00000637897 CD99L2Q8TCZ2 262 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms