RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
CACNA1A-249ENST00000637777 USP40Q9NVE5 1235 aa17.63■□□□□ 0.41
CACNA1A-249ENST00000637777 FZD1Q9UP38 647 aa17.63■□□□□ 0.41
CACNA1A-249ENST00000637777 MAP2K2P36507 400 aa17.62■□□□□ 0.41
CACNA1A-249ENST00000637777 IREB2P48200 963 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-249ENST00000637777 TCP10Q12799 353 aa17.62■□□□□ 0.41
CACNA1A-249ENST00000637777 CRBNQ96SW2 442 aa17.62■□□□□ 0.41
CACNA1A-249ENST00000637777 MECOMQ03112 1051 aa17.61■□□□□ 0.41
CACNA1A-249ENST00000637777 MKRN3Q13064 507 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-249ENST00000637777 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
CACNA1A-249ENST00000637777 LDHCP07864 332 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 SLC10A3P09131 477 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 BTDP43251 543 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 ZAP70P43403 619 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 RASAL3Q86YV0 1011 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 MROH7-TTC4A0A0A0MT08 1334 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 THSD7BQ9C0I4 1608 aa17.6■□□□□ 0.41
CACNA1A-249ENST00000637777 MAST2Q6P0Q8 1798 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 SSC5DA1L4H1 1573 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 ZBTB22O15209 634 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 NAA16Q6N069 864 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
CACNA1A-249ENST00000637777 FOXN1O15353 648 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 CTCFP49711 727 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 PICALMQ13492 652 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 FAM83AQ86UY5 434 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 CDAN1Q8IWY9 1227 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 DNAJC2Q99543 621 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 WBP1LQ9NX94 342 aa17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 ZBTB47Q9UFB7 747 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-249ENST00000637777 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 GAKO14976 1311 aa17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 FAM155AB1AL88 458 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 FKBP1CQ5VVH2 108 aa17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 DCAF15Q66K64 600 aa17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 ZNF512BQ96KM6 892 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 ZIC5Q96T25 663 aa17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 NDUFB9Q9Y6M9 179 aa17.57■□□□□ 0.4
CACNA1A-249ENST00000637777 SMARCA5O60264 1052 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 NFIAQ12857 509 aa17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 ANKRD13AQ8IZ07 590 aa17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 FAM151AQ8WW52 585 aa17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 TSKSQ9UJT2 592 aa17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 CSADQ9Y600 493 aa17.56■□□□□ 0.4
CACNA1A-249ENST00000637777 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 BAG3O95817 575 aa17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 RGS3P49796 1198 aa17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 CLMNQ96JQ2 1002 aa17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 TEPSINQ96N21 525 aa17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
CACNA1A-249ENST00000637777 RPAP1Q9BWH6 1393 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 LBX1P52954 281 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 MAP3K12Q12852 859 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 TEX11Q8IYF3 940 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 WRNIP1Q96S55 665 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 ELP3Q9H9T3 547 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 PCDHB15Q9Y5E8 787 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 DOCK2Q92608 1830 aa17.54■□□□□ 0.4
CACNA1A-249ENST00000637777 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 CA12O43570 354 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 CYP7A1P22680 504 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 TTF1Q15361 905 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 MAGEB6Q8N7X4 407 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 CSRNP1Q96S65 589 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-249ENST00000637777 GOLIM4O00461 696 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 PLCG2P16885 1265 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 ZNF384Q8TF68 577 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 BOLA2Q9H3K6 86 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
CACNA1A-249ENST00000637777 ENTPD3O75355 529 aa17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 HSPA8P11142 646 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 SPRYD7Q5W111 196 aa17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 REM2Q8IYK8 340 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 WNK4Q96J92 1243 aa17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 IDI2Q9BXS1 227 aa17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
CACNA1A-249ENST00000637777 UNCXA6NJT0 531 aa17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 WDHD1O75717 1129 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-249ENST00000637777 TRPA1O75762 1119 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms