RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 WRNIP1Q96S55 665 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 ZNF341Q9BYN7 854 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 TMEM39BQ9GZU3 492 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 CNNM1Q9NRU3 951 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 SLC45A1Q9Y2W3 748 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 MROH5Q6ZUA9 1318 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 MYPNQ86TC9 1320 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 SZT2Q5T011 3432 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 TCP10L2B9ZVM9 353 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 CXCL11O14625 94 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 FMNL1O95466 1100 aaPredicted RBP9.26□□□□□ -0.93
CIITA-214ENST00000636238 OSBPP22059 807 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 FKBP5Q13451 457 aaPredicted RBP9.26□□□□□ -0.93
CIITA-214ENST00000636238 IRF5Q13568 498 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 TAF7LQ5H9L4 462 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 NOL9Q5SY16 702 aaKnown RBP9.26□□□□□ -0.93
CIITA-214ENST00000636238 C20orf194Q5TEA3 1177 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 HHIPL2Q6UWX4 724 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 TSPYL6Q8N831 410 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 U2AF1L4Q8WU68 220 aaKnown RBP9.26□□□□□ -0.93
CIITA-214ENST00000636238 CNKSR2Q8WXI2 1034 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
CIITA-214ENST00000636238 ARHGAP39Q9C0H5 1083 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 RNF208Q9H0X6 261 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 ZNF112Q9UJU3 913 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 CACNA1FO60840 1977 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 AOX1Q06278 1338 aa9.26□□□□□ -0.93
CIITA-214ENST00000636238 PDHXO00330 501 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 EVI5O60447 810 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 SGPL1O95470 568 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 BCRP11274 1271 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 MTFR1Q15390 333 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 LMBR1LQ6UX01 489 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 FBXO33Q7Z6M2 555 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 ANKLE1Q8NAG6 615 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 FRAT1Q92837 279 aaPredicted RBP9.25□□□□□ -0.93
CIITA-214ENST00000636238 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.25□□□□□ -0.93
CIITA-214ENST00000636238 A0A0C4DFX4 3053 aa9.25□□□□□ -0.93
CIITA-214ENST00000636238 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 SNAP23O00161 211 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 GRM8O00222 908 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 ZBTB22O15209 634 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 VAMP4O75379 141 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 ALDH1L1O75891 902 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 FASTKD5Q7L8L6 764 aaKnown RBP9.24□□□□□ -0.93
CIITA-214ENST00000636238 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.24□□□□□ -0.93
CIITA-214ENST00000636238 FAM151AQ8WW52 585 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 CRBNQ96SW2 442 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 CRISPLD2Q9H0B8 497 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 BIN2Q9UBW5 565 aaPredicted RBP9.24□□□□□ -0.93
CIITA-214ENST00000636238 TNNQ9UQP3 1299 aa9.24□□□□□ -0.93
CIITA-214ENST00000636238 CT47B1P0C2W7 299 aaPredicted RBP9.23□□□□□ -0.93
CIITA-214ENST00000636238 LRIT3Q3SXY7 679 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 APOBEC3HQ6NTF7 200 aaKnown RBP9.23□□□□□ -0.93
CIITA-214ENST00000636238 G2E3Q7L622 706 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 CDAN1Q8IWY9 1227 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 ZKSCAN4Q969J2 545 aaPredicted RBP9.23□□□□□ -0.93
CIITA-214ENST00000636238 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
CIITA-214ENST00000636238 SMC4Q9NTJ3 1288 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 CPA4Q9UI42 421 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 STXBP5LQ9Y2K9 1186 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 MYH3P11055 1940 aa9.23□□□□□ -0.93
CIITA-214ENST00000636238 ADCY3O60266 1144 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
CIITA-214ENST00000636238 CTGFP29279 349 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 GYG1P46976 350 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 PRKCZQ05513 592 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 MOGSQ13724 837 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 NECAB2Q7Z6G3 386 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 GDF15Q99988 308 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 JAG2Q9Y219 1238 aa9.22□□□□□ -0.93
CIITA-214ENST00000636238 FRAT2O75474 233 aaPredicted RBP9.21□□□□□ -0.94
CIITA-214ENST00000636238 ERICH6BQ5W0A0 696 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.94
CIITA-214ENST00000636238 PANK1Q8TE04 598 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 UNC93B1Q9H1C4 597 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 C9orf78Q9NZ63 289 aaPredicted RBP9.21□□□□□ -0.94
CIITA-214ENST00000636238 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.94
CIITA-214ENST00000636238 ARAP2Q8WZ64 1704 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 LAMA3Q16787 3333 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 OTOFQ9HC10 1997 aa9.21□□□□□ -0.94
CIITA-214ENST00000636238 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
CIITA-214ENST00000636238 PDE8BO95263 885 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 TFRCP02786 760 aaKnown RBP9.2□□□□□ -0.94
CIITA-214ENST00000636238 INHAP05111 366 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 FLT3LGP49771 235 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 RABL6Q3YEC7 729 aaPredicted RBP9.2□□□□□ -0.94
CIITA-214ENST00000636238 FAM109BQ6ICB4 259 aaPredicted RBP9.2□□□□□ -0.94
CIITA-214ENST00000636238 B4GALNT3Q6L9W6 998 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
CIITA-214ENST00000636238 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms