RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDKL5-209ENST00000635828 ERC2O15083 957 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 PICALMQ13492 652 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 TBC1D22AQ8WUA7 517 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 FOXP2O15409 715 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 RHBDL3P58872 404 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 ZBED3Q96IU2 234 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 H7C1D1 291 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 VEGFAP15692 232 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 STK11IPQ8N1F8 1099 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 TEKT1Q969V4 418 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
CDKL5-209ENST00000635828 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 MROH7-TTC4A0A0A0MT08 1334 aa10.33□□□□□ -0.76
CDKL5-209ENST00000635828 DLGAP5Q15398 846 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 RIOK1Q9BRS2 568 aaKnown RBP10.32□□□□□ -0.76
CDKL5-209ENST00000635828 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
CDKL5-209ENST00000635828 FAM196BA6NMK8 535 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 HTRA3P83110 453 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 MAST2Q6P0Q8 1798 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 ZC3H4Q9UPT8 1303 aaKnown RBP10.32□□□□□ -0.76
CDKL5-209ENST00000635828 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 RPS12P25398 132 aaKnown RBP10.32□□□□□ -0.76
CDKL5-209ENST00000635828 ZDHHC15Q96MV8 337 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
CDKL5-209ENST00000635828 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
CDKL5-209ENST00000635828 HTTP42858 3142 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 WDHD1O75717 1129 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MBD4O95243 580 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 FKBP1AP62942 108 aaKnown RBP10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MAP3K12Q12852 859 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 PRKG1Q13976 671 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MOB2Q70IA6 237 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 USP40Q9NVE5 1235 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 FAM198AQ9UFP1 575 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 GAKO14976 1311 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MAST3O60307 1309 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 SHROOM1Q2M3G4 852 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MAPKAPK5Q8IW41 473 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 TGFBRAP1Q8WUH2 860 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 EVI5LQ96CN4 794 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 ZNF70Q9UC06 446 aaPredicted RBP10.31□□□□□ -0.76
CDKL5-209ENST00000635828 SAP30BPQ9UHR5 308 aaKnown RBP10.31□□□□□ -0.76
CDKL5-209ENST00000635828 MYO3BQ8WXR4 1341 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 SH3BP5LQ7L8J4 393 aa10.31□□□□□ -0.76
CDKL5-209ENST00000635828 GPR75-ASB3A0A0A6YYF3 556 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-209ENST00000635828 USP48Q86UV5 1035 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 INCENPQ9NQS7 918 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 RNF113AO15541 343 aaKnown RBP10.3□□□□□ -0.76
CDKL5-209ENST00000635828 TTF1Q15361 905 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-209ENST00000635828 CNTROBQ8N137 903 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-209ENST00000635828 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
CDKL5-209ENST00000635828 SEC24BO95487 1268 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 CYP2D6P10635 497 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 HHIPL2Q6UWX4 724 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 HDAC9Q9UKV0 1011 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 PALD1Q9ULE6 856 aa10.3□□□□□ -0.76
CDKL5-209ENST00000635828 CHMLP26374 656 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 ZGPATQ8N5A5 531 aaKnown RBP10.29□□□□□ -0.76
CDKL5-209ENST00000635828 ZNF408Q9H9D4 720 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 TAF6LQ9Y6J9 622 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 GPAA1O43292 621 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 MIGA2Q7L4E1 593 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
CDKL5-209ENST00000635828 IQCA1LA6NCM1 817 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 SPDYE2Q495Y8 402 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
CDKL5-209ENST00000635828 NBPF12Q5TAG4 269 aaPredicted RBP10.29□□□□□ -0.76
CDKL5-209ENST00000635828 SPTY2D1Q68D10 685 aaPredicted RBP10.29□□□□□ -0.76
CDKL5-209ENST00000635828 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 RASA3Q14644 834 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 BMP2KLQ5H9B9 411 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 DEFB129Q9H1M3 183 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 MKI67P46013 3256 aaKnown RBP10.28□□□□□ -0.76
CDKL5-209ENST00000635828 FOCADQ5VW36 1801 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 SSC5DA1L4H1 1573 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 PLCD1P51178 756 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 PTH1RQ03431 593 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 USP50Q70EL3 339 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-209ENST00000635828 KRT26Q7Z3Y9 468 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-209ENST00000635828 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
CDKL5-209ENST00000635828 TACC3Q9Y6A5 838 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
CDKL5-209ENST00000635828 TEX11Q8IYF3 940 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 TEPSINQ96N21 525 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 SUGT1Q9Y2Z0 365 aa10.28□□□□□ -0.76
CDKL5-209ENST00000635828 FLT1P17948 1338 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms