RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GSTO1P78417 241 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 KIF23Q02241 960 aaPredicted RBP19.22■□□□□ 0.67
LINC00339-207ENST00000634712 TBC1D9Q6ZT07 1266 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 FAM83AQ86UY5 434 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 CLASRPQ8N2M8 674 aaKnown RBP19.22■□□□□ 0.67
LINC00339-207ENST00000634712 IL1RAPL2Q9NP60 686 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 SNRKQ9NRH2 765 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 DBNLQ9UJU6 430 aaKnown RBP19.22■□□□□ 0.67
LINC00339-207ENST00000634712 FZD1Q9UP38 647 aa19.22■□□□□ 0.67
LINC00339-207ENST00000634712 LDHCP07864 332 aa19.21■□□□□ 0.67
LINC00339-207ENST00000634712 CDC42EP5Q6NZY7 148 aa19.21■□□□□ 0.67
LINC00339-207ENST00000634712 RASAL3Q86YV0 1011 aa19.21■□□□□ 0.67
LINC00339-207ENST00000634712 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
LINC00339-207ENST00000634712 SLC10A4Q96EP9 437 aa19.21■□□□□ 0.67
LINC00339-207ENST00000634712 ZNF512BQ96KM6 892 aaPredicted RBP19.21■□□□□ 0.67
LINC00339-207ENST00000634712 MECOMQ03112 1051 aa19.2■□□□□ 0.66
LINC00339-207ENST00000634712 LDLRAD1Q5T700 205 aa19.2■□□□□ 0.66
LINC00339-207ENST00000634712 REM2Q8IYK8 340 aaPredicted RBP19.2■□□□□ 0.66
LINC00339-207ENST00000634712 ZIC5Q96T25 663 aa19.2■□□□□ 0.66
LINC00339-207ENST00000634712 TLR7Q9NYK1 1049 aaKnown RBP19.2■□□□□ 0.66
LINC00339-207ENST00000634712 CA12O43570 354 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 USP2O75604 605 aaPredicted RBP19.19■□□□□ 0.66
LINC00339-207ENST00000634712 IFIT2P09913 472 aaKnown RBP19.19■□□□□ 0.66
LINC00339-207ENST00000634712 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 FAM163AQ96GL9 167 aaPredicted RBP19.19■□□□□ 0.66
LINC00339-207ENST00000634712 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 UNCXA6NJT0 531 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 BTDP43251 543 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 TCP10Q12799 353 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 FAM151AQ8WW52 585 aa19.19■□□□□ 0.66
LINC00339-207ENST00000634712 NOL10Q9BSC4 688 aaKnown RBP19.19■□□□□ 0.66
LINC00339-207ENST00000634712 MROH7-TTC4A0A0A0MT08 1334 aa19.18■□□□□ 0.66
LINC00339-207ENST00000634712 GAKO14976 1311 aa19.18■□□□□ 0.66
LINC00339-207ENST00000634712 MYH2Q9UKX2 1941 aa19.18■□□□□ 0.66
LINC00339-207ENST00000634712 ZAP70P43403 619 aa19.18■□□□□ 0.66
LINC00339-207ENST00000634712 MKRN3Q13064 507 aaKnown RBP19.18■□□□□ 0.66
LINC00339-207ENST00000634712 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
LINC00339-207ENST00000634712 NSUN4Q96CB9 384 aaKnown RBP19.18■□□□□ 0.66
LINC00339-207ENST00000634712 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
LINC00339-207ENST00000634712 LBX1P52954 281 aa19.17■□□□□ 0.66
LINC00339-207ENST00000634712 CDAN1Q8IWY9 1227 aa19.17■□□□□ 0.66
LINC00339-207ENST00000634712 SSC5DA1L4H1 1573 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 GPR75-ASB3A0A0A6YYF3 556 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 CYP2E1P05181 493 aaPredicted RBP19.16■□□□□ 0.66
LINC00339-207ENST00000634712 NFIAQ12857 509 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 DCAF15Q66K64 600 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 NAA16Q6N069 864 aaPredicted RBP19.16■□□□□ 0.66
LINC00339-207ENST00000634712 CSRNP1Q96S65 589 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 PRDM10Q9NQV6 1147 aa19.16■□□□□ 0.66
LINC00339-207ENST00000634712 IGSF3O75054 1194 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 HSPA8P11142 646 aaKnown RBP19.15■□□□□ 0.66
LINC00339-207ENST00000634712 MAP3K9P80192 1104 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 COL13A1Q5TAT6 717 aaPredicted RBP19.15■□□□□ 0.66
LINC00339-207ENST00000634712 CLMNQ96JQ2 1002 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 LRRCC1Q9C099 1032 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 FAM198AQ9UFP1 575 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 CSADQ9Y600 493 aa19.15■□□□□ 0.66
LINC00339-207ENST00000634712 ENTPD3O75355 529 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 BAG3O95817 575 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 RGS3P49796 1198 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 SPRYD7Q5W111 196 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 ZSCAN29Q8IWY8 852 aaPredicted RBP19.14■□□□□ 0.65
LINC00339-207ENST00000634712 CRBNQ96SW2 442 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 IDI2Q9BXS1 227 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 TSKSQ9UJT2 592 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 AK9Q5TCS8 1911 aa19.14■□□□□ 0.65
LINC00339-207ENST00000634712 RPAP1Q9BWH6 1393 aaPredicted RBP19.13■□□□□ 0.65
LINC00339-207ENST00000634712 IDH1O75874 414 aaKnown RBP19.13■□□□□ 0.65
LINC00339-207ENST00000634712 MAP4K4O95819 1239 aaPredicted RBP19.13■□□□□ 0.65
LINC00339-207ENST00000634712 SREBF2Q12772 1141 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 PICALMQ13492 652 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 MIGA2Q7L4E1 593 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 ZNF384Q8TF68 577 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 ZNF341Q9BYN7 854 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 ELP3Q9H9T3 547 aa19.13■□□□□ 0.65
LINC00339-207ENST00000634712 TRPA1O75762 1119 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 ZBTB48P10074 688 aaPredicted RBP19.12■□□□□ 0.65
LINC00339-207ENST00000634712 TTF1Q15361 905 aaPredicted RBP19.12■□□□□ 0.65
LINC00339-207ENST00000634712 WNK4Q96J92 1243 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 WRNIP1Q96S55 665 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
LINC00339-207ENST00000634712 RNF186Q9NXI6 227 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 AKAP11Q9UKA4 1901 aa19.12■□□□□ 0.65
LINC00339-207ENST00000634712 PLCG2P16885 1265 aa19.11■□□□□ 0.65
LINC00339-207ENST00000634712 MAP3K12Q12852 859 aa19.11■□□□□ 0.65
LINC00339-207ENST00000634712 ZFPM1Q8IX07 1006 aa19.11■□□□□ 0.65
LINC00339-207ENST00000634712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.11■□□□□ 0.654e-7■■■■■ 38.1
LINC00339-207ENST00000634712 SAGE1Q9NXZ1 904 aa19.11■□□□□ 0.65
LINC00339-207ENST00000634712 NDUFB9Q9Y6M9 179 aa19.11■□□□□ 0.65
LINC00339-207ENST00000634712 MANSC4A6NHS7 340 aaPredicted RBP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 WDHD1O75717 1129 aaPredicted RBP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 CYP7A1P22680 504 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 TM4SF4P48230 202 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 INHBEP58166 350 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 RHBDL3P58872 404 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 VGLL4Q14135 290 aa19.1■□□□□ 0.65
LINC00339-207ENST00000634712 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.1■□□□□ 0.65
LINC00339-207ENST00000634712 TEX11Q8IYF3 940 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms