RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 MAP2K1Q02750 393 aaPredicted RBP25.52■■□□□ 1.68
SF1-221ENST00000633899 NOGQ13253 232 aa25.52■■□□□ 1.68
SF1-221ENST00000633899 NBPF12Q5TAG4 269 aaPredicted RBP25.52■■□□□ 1.68
SF1-221ENST00000633899 MECOMQ03112 1051 aa25.51■■□□□ 1.67
SF1-221ENST00000633899 FKBP1CQ5VVH2 108 aa25.51■■□□□ 1.67
SF1-221ENST00000633899 USP40Q9NVE5 1235 aa25.51■■□□□ 1.67
SF1-221ENST00000633899 GAKO14976 1311 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 PCNTO95613 3336 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 LDHCP07864 332 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 CDC42EP5Q6NZY7 148 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 FAM83AQ86UY5 434 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 BEGAINQ9BUH8 593 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 TMEM39BQ9GZU3 492 aa25.5■■□□□ 1.67
SF1-221ENST00000633899 MYO5AQ9Y4I1 1855 aaKnown RBP25.5■■□□□ 1.67
SF1-221ENST00000633899 SSC5DA1L4H1 1573 aa25.49■■□□□ 1.67
SF1-221ENST00000633899 MROH7-TTC4A0A0A0MT08 1334 aa25.49■■□□□ 1.67
SF1-221ENST00000633899 LRRCC1Q9C099 1032 aa25.49■■□□□ 1.67
SF1-221ENST00000633899 SLC10A3P09131 477 aa25.48■■□□□ 1.67
SF1-221ENST00000633899 ZAP70P43403 619 aa25.48■■□□□ 1.67
SF1-221ENST00000633899 IREB2P48200 963 aaKnown RBP25.48■■□□□ 1.67
SF1-221ENST00000633899 NOL10Q9BSC4 688 aaKnown RBP25.48■■□□□ 1.67
SF1-221ENST00000633899 FZD1Q9UP38 647 aa25.48■■□□□ 1.67
SF1-221ENST00000633899 BTDP43251 543 aa25.47■■□□□ 1.67
SF1-221ENST00000633899 RASAL3Q86YV0 1011 aa25.47■■□□□ 1.67
SF1-221ENST00000633899 NSUN4Q96CB9 384 aaKnown RBP25.47■■□□□ 1.67
SF1-221ENST00000633899 HOOK2Q96ED9 719 aa25.47■■□□□ 1.67
SF1-221ENST00000633899 FAM163AQ96GL9 167 aaPredicted RBP25.47■■□□□ 1.67
SF1-221ENST00000633899 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.47■■□□□ 1.67
SF1-221ENST00000633899 CYP2E1P05181 493 aaPredicted RBP25.46■■□□□ 1.67
SF1-221ENST00000633899 TCP10Q12799 353 aa25.46■■□□□ 1.67
SF1-221ENST00000633899 NAA16Q6N069 864 aaPredicted RBP25.46■■□□□ 1.67
SF1-221ENST00000633899 TEPSINQ96N21 525 aa25.46■■□□□ 1.67
SF1-221ENST00000633899 WBP1LQ9NX94 342 aa25.46■■□□□ 1.67
SF1-221ENST00000633899 RPAP1Q9BWH6 1393 aaPredicted RBP25.45■■□□□ 1.67
SF1-221ENST00000633899 FAM155AB1AL88 458 aaPredicted RBP25.45■■□□□ 1.66
SF1-221ENST00000633899 FAM151AQ8WW52 585 aa25.45■■□□□ 1.66
SF1-221ENST00000633899 PCDHB15Q9Y5E8 787 aa25.45■■□□□ 1.66
SF1-221ENST00000633899 MAP3K11Q16584 847 aa25.44■■□□□ 1.66
SF1-221ENST00000633899 CDAN1Q8IWY9 1227 aa25.44■■□□□ 1.66
SF1-221ENST00000633899 DCTPP1Q9H773 170 aa25.44■■□□□ 1.66
SF1-221ENST00000633899 OTOFQ9HC10 1997 aa25.44■■□□□ 1.66
SF1-221ENST00000633899 DOCK2Q92608 1830 aa25.43■■□□□ 1.66
SF1-221ENST00000633899 GPR75-ASB3A0A0A6YYF3 556 aa25.43■■□□□ 1.66
SF1-221ENST00000633899 IGSF3O75054 1194 aa25.43■■□□□ 1.66
SF1-221ENST00000633899 IDH1O75874 414 aaKnown RBP25.43■■□□□ 1.66
SF1-221ENST00000633899 NFIAQ12857 509 aa25.43■■□□□ 1.66
SF1-221ENST00000633899 LDLRAD1Q5T700 205 aa25.43■■□□□ 1.66
SF1-221ENST00000633899 SMARCA5O60264 1052 aaPredicted RBP25.42■■□□□ 1.66
SF1-221ENST00000633899 USP2O75604 605 aaPredicted RBP25.42■■□□□ 1.66
SF1-221ENST00000633899 KIF23Q02241 960 aaPredicted RBP25.42■■□□□ 1.66
SF1-221ENST00000633899 DCAF15Q66K64 600 aa25.42■■□□□ 1.66
SF1-221ENST00000633899 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
SF1-221ENST00000633899 ZNF384Q8TF68 577 aa25.42■■□□□ 1.66
SF1-221ENST00000633899 SLC10A4Q96EP9 437 aa25.42■■□□□ 1.66
SF1-221ENST00000633899 PIH1D3Q9NQM4 214 aaKnown RBP25.42■■□□□ 1.66
SF1-221ENST00000633899 NDUFB9Q9Y6M9 179 aa25.42■■□□□ 1.66
SF1-221ENST00000633899 UNCXA6NJT0 531 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 FOXN1O15353 648 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 BAG3O95817 575 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 RGS3P49796 1198 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 AAMPQ13685 434 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 TTF1Q15361 905 aaPredicted RBP25.41■■□□□ 1.66
SF1-221ENST00000633899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.41■■□□□ 1.66
SF1-221ENST00000633899 ZIC5Q96T25 663 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 DNAJC2Q99543 621 aaKnown RBP25.41■■□□□ 1.66
SF1-221ENST00000633899 IDI2Q9BXS1 227 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 FAM198AQ9UFP1 575 aa25.41■■□□□ 1.66
SF1-221ENST00000633899 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
SF1-221ENST00000633899 ENTPD3O75355 529 aa25.4■■□□□ 1.66
SF1-221ENST00000633899 MAP4K4O95819 1239 aaPredicted RBP25.4■■□□□ 1.66
SF1-221ENST00000633899 CTCFP49711 727 aaPredicted RBP25.4■■□□□ 1.66
SF1-221ENST00000633899 MAP3K12Q12852 859 aa25.4■■□□□ 1.66
SF1-221ENST00000633899 MKRN3Q13064 507 aaKnown RBP25.4■■□□□ 1.66
SF1-221ENST00000633899 PICALMQ13492 652 aa25.4■■□□□ 1.66
SF1-221ENST00000633899 ZSCAN29Q8IWY8 852 aaPredicted RBP25.4■■□□□ 1.66
SF1-221ENST00000633899 REM2Q8IYK8 340 aaPredicted RBP25.4■■□□□ 1.66
SF1-221ENST00000633899 ZBTB47Q9UFB7 747 aaPredicted RBP25.39■■□□□ 1.66
SF1-221ENST00000633899 CA12O43570 354 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 PLCG2P16885 1265 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 GPATCH3Q96I76 525 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 CLMNQ96JQ2 1002 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 ANTXR1Q9H6X2 564 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 AATFQ9NY61 560 aaKnown RBP eCLIP25.38■■□□□ 1.653e-6■■□□□ 13.7
SF1-221ENST00000633899 CSADQ9Y600 493 aa25.38■■□□□ 1.65
SF1-221ENST00000633899 RFX7Q2KHR2 1363 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 WDHD1O75717 1129 aaPredicted RBP25.37■■□□□ 1.65
SF1-221ENST00000633899 CYP7A1P22680 504 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 RHBDL3P58872 404 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 MAP3K9P80192 1104 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 TEX11Q8IYF3 940 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 MAGEB6Q8N7X4 407 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 ZNF341Q9BYN7 854 aa25.37■■□□□ 1.65
SF1-221ENST00000633899 GOLIM4O00461 696 aa25.36■■□□□ 1.65
SF1-221ENST00000633899 MIGA2Q7L4E1 593 aa25.36■■□□□ 1.65
SF1-221ENST00000633899 WRNIP1Q96S55 665 aa25.36■■□□□ 1.65
SF1-221ENST00000633899 BOLA2Q9H3K6 86 aa25.36■■□□□ 1.65
SF1-221ENST00000633899 CDK5RAP2Q96SN8 1893 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 ATP5JP18859 108 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 SPRYD7Q5W111 196 aa25.35■■□□□ 1.65
SF1-221ENST00000633899 TMED8Q6PL24 325 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms