RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.91■□□□□ 0.46
PNKP-221ENST00000627317 CCDC102AQ96A19 550 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 ZDHHC15Q96MV8 337 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 DNAJC2Q99543 621 aaKnown RBP17.91■□□□□ 0.46
PNKP-221ENST00000627317 ZNF70Q9UC06 446 aaPredicted RBP17.91■□□□□ 0.46
PNKP-221ENST00000627317 ABCF2Q9UG63 623 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
PNKP-221ENST00000627317 ERC2O15083 957 aa17.9■□□□□ 0.46
PNKP-221ENST00000627317 LDHBP07195 334 aaKnown RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 CTCFP49711 727 aaPredicted RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 ZNF157P51786 506 aaPredicted RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 RBM5P52756 815 aaKnown RBP eCLIP17.9■□□□□ 0.46
PNKP-221ENST00000627317 SPTY2D1Q68D10 685 aaPredicted RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 APOBEC3HQ6NTF7 200 aaKnown RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
PNKP-221ENST00000627317 BOLA2Q9H3K6 86 aa17.9■□□□□ 0.46
PNKP-221ENST00000627317 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
PNKP-221ENST00000627317 MAST3O60307 1309 aa17.9■□□□□ 0.46
PNKP-221ENST00000627317 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 PRDX5P30044 214 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 RASA3Q14644 834 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 LDLRAD1Q5T700 205 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 HHIPL2Q6UWX4 724 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 TEKT1Q969V4 418 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 TEPSINQ96N21 525 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 PRDM10Q9NQV6 1147 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
PNKP-221ENST00000627317 GLRX3O76003 335 aaKnown RBP17.88■□□□□ 0.45
PNKP-221ENST00000627317 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 DZIP1Q86YF9 867 aaKnown RBP17.88■□□□□ 0.45
PNKP-221ENST00000627317 CDAN1Q8IWY9 1227 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 HAUS7Q99871 368 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 LRP2BPQ9P2M1 347 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 NDUFB9Q9Y6M9 179 aa17.88■□□□□ 0.45
PNKP-221ENST00000627317 GOLIM4O00461 696 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
PNKP-221ENST00000627317 NF2P35240 595 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 PDE1AP54750 535 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 TTF1Q15361 905 aaPredicted RBP17.87■□□□□ 0.45
PNKP-221ENST00000627317 NBPF12Q5TAG4 269 aaPredicted RBP17.87■□□□□ 0.45
PNKP-221ENST00000627317 RAI14Q9P0K7 980 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 FZD1Q9UP38 647 aa17.87■□□□□ 0.45
PNKP-221ENST00000627317 LBX1P52954 281 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 KIF23Q02241 960 aaPredicted RBP17.86■□□□□ 0.45
PNKP-221ENST00000627317 TNFAIP1Q13829 316 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 DIXDC1Q155Q3 683 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 PI4K2BQ8TCG2 481 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
PNKP-221ENST00000627317 PAG1Q9NWQ8 432 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 DAGLAQ9Y4D2 1042 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 MAST2Q6P0Q8 1798 aa17.86■□□□□ 0.45
PNKP-221ENST00000627317 CA12O43570 354 aa17.85■□□□□ 0.45
PNKP-221ENST00000627317 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
PNKP-221ENST00000627317 PDE4AP27815 886 aa17.85■□□□□ 0.45
PNKP-221ENST00000627317 FKBP1CQ5VVH2 108 aa17.85■□□□□ 0.45
PNKP-221ENST00000627317 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
PNKP-221ENST00000627317 RFX7Q2KHR2 1363 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 RPAP1Q9BWH6 1393 aaPredicted RBP17.84■□□□□ 0.45
PNKP-221ENST00000627317 GAKO14976 1311 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 TCP10L2B9ZVM9 353 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 CACNB3P54284 484 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 IFFO2Q5TF58 517 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 ARMC9Q7Z3E5 817 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 SLF2Q8IX21 1173 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 ZNF384Q8TF68 577 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
PNKP-221ENST00000627317 TMEM39BQ9GZU3 492 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 ANTXR1Q9H6X2 564 aa17.84■□□□□ 0.45
PNKP-221ENST00000627317 GSTO1P78417 241 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 MECOMQ03112 1051 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 MAP3K12Q12852 859 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 PRKG1Q13976 671 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 TTLL12Q14166 644 aaPredicted RBP17.83■□□□□ 0.44
PNKP-221ENST00000627317 SUPT20HL1Q3ZLR7 823 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 CSRNP1Q96S65 589 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.44
PNKP-221ENST00000627317 DOCK2Q92608 1830 aa17.83■□□□□ 0.44
PNKP-221ENST00000627317 UNCXA6NJT0 531 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 IGSF3O75054 1194 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 USP2O75604 605 aaPredicted RBP17.82■□□□□ 0.44
PNKP-221ENST00000627317 MAP4K4O95819 1239 aaPredicted RBP17.82■□□□□ 0.44
PNKP-221ENST00000627317 NAA16Q6N069 864 aaPredicted RBP17.82■□□□□ 0.44
PNKP-221ENST00000627317 FAM83AQ86UY5 434 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 CLMNQ96JQ2 1002 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 BEGAINQ9BUH8 593 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 OTOFQ9HC10 1997 aa17.82■□□□□ 0.44
PNKP-221ENST00000627317 MYO5AQ9Y4I1 1855 aaKnown RBP17.82■□□□□ 0.44
PNKP-221ENST00000627317 MYH2Q9UKX2 1941 aa17.81■□□□□ 0.44
PNKP-221ENST00000627317 PPP1R12BO60237 982 aaPredicted RBP17.81■□□□□ 0.44
PNKP-221ENST00000627317 LDHCP07864 332 aa17.81■□□□□ 0.44
PNKP-221ENST00000627317 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms