RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
NELFE-214ENST00000625905 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
NELFE-214ENST00000625905 IGSF3O75054 1194 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 IDH1O75874 414 aaKnown RBP11.23□□□□□ -0.61
NELFE-214ENST00000625905 LDHCP07864 332 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
NELFE-214ENST00000625905 DEFB115Q30KQ5 88 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 NAA16Q6N069 864 aaPredicted RBP11.23□□□□□ -0.61
NELFE-214ENST00000625905 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
NELFE-214ENST00000625905 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
NELFE-214ENST00000625905 ATP5JP18859 108 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 ECE1P42892 770 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 GRM1Q13255 1194 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 ZNF384Q8TF68 577 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 FAM163AQ96GL9 167 aaPredicted RBP11.22□□□□□ -0.61
NELFE-214ENST00000625905 HHIPL1Q96JK4 782 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 TMEM39BQ9GZU3 492 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
NELFE-214ENST00000625905 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 USP40Q9NVE5 1235 aa11.22□□□□□ -0.61
NELFE-214ENST00000625905 MYO5AQ9Y4I1 1855 aaKnown RBP11.22□□□□□ -0.61
NELFE-214ENST00000625905 GPR75-ASB3A0A0A6YYF3 556 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 GOLIM4O00461 696 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 VEGFBP49765 207 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 NFIAQ12857 509 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 PRKG1Q13976 671 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.61
NELFE-214ENST00000625905 CYP4F22Q6NT55 531 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 ARMC9Q7Z3E5 817 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 CDAN1Q8IWY9 1227 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 CAPNS2Q96L46 248 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 BOLA2Q9H3K6 86 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 ANTXR1Q9H6X2 564 aa11.21□□□□□ -0.61
NELFE-214ENST00000625905 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
NELFE-214ENST00000625905 WDR33Q9C0J8 1336 aaKnown RBP11.2□□□□□ -0.62
NELFE-214ENST00000625905 PPP1R12BO60237 982 aaPredicted RBP11.2□□□□□ -0.62
NELFE-214ENST00000625905 BAG3O95817 575 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 PLCG2P16885 1265 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 CYP7A1P22680 504 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 TCP10Q12799 353 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
NELFE-214ENST00000625905 MOB2Q70IA6 237 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 MAGEB6Q8N7X4 407 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 HAUS7Q99871 368 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
NELFE-214ENST00000625905 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
NELFE-214ENST00000625905 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 UBE2Q2LH0YL09 131 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 MX1P20591 662 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 RGS3P49796 1198 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 ZNF157P51786 506 aaPredicted RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 RHBDL3P58872 404 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 PICALMQ13492 652 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 EDC3Q96F86 508 aaKnown RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 IDI2Q9BXS1 227 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.19□□□□□ -0.62
NELFE-214ENST00000625905 AATFQ9NY61 560 aaKnown RBP eCLIP11.19□□□□□ -0.62
NELFE-214ENST00000625905 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 MYH7P12883 1935 aa11.19□□□□□ -0.62
NELFE-214ENST00000625905 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
NELFE-214ENST00000625905 ERC2O15083 957 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 ENTPD3O75355 529 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 IGHDP01880 384 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 SLC10A3P09131 477 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 PDE6AP16499 860 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 IREB2P48200 963 aaKnown RBP11.18□□□□□ -0.62
NELFE-214ENST00000625905 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 ZSCAN29Q8IWY8 852 aaPredicted RBP11.18□□□□□ -0.62
NELFE-214ENST00000625905 TEX11Q8IYF3 940 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 MIGA1Q8NAN2 632 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 SH3RF3Q8TEJ3 882 aaPredicted RBP11.18□□□□□ -0.62
NELFE-214ENST00000625905 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 FZD1Q9UP38 647 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 FOCADQ5VW36 1801 aa11.18□□□□□ -0.62
NELFE-214ENST00000625905 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
NELFE-214ENST00000625905 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms