RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CEP126Q9P2H0 1117 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 PTCH2Q9Y6C5 1203 aa23.67■■□□□ 1.38
SMN1-211ENST00000625245 BTBD19C9JJ37 291 aa23.66■■□□□ 1.38
SMN1-211ENST00000625245 PPIL2Q13356 520 aa23.66■■□□□ 1.38
SMN1-211ENST00000625245 DIXDC1Q155Q3 683 aa23.66■■□□□ 1.38
SMN1-211ENST00000625245 ATP2B3Q16720 1220 aa23.66■■□□□ 1.38
SMN1-211ENST00000625245 GNL3LQ9NVN8 582 aaKnown RBP23.66■■□□□ 1.38
SMN1-211ENST00000625245 HTTP42858 3142 aa23.66■■□□□ 1.38
SMN1-211ENST00000625245 RBBP6Q7Z6E9 1792 aaKnown RBP23.65■■□□□ 1.38
SMN1-211ENST00000625245 INPP5BP32019 993 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 KIF22Q14807 665 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 SLC9C1Q4G0N8 1177 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 NBPF11Q86T75 865 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 PCDH10Q9P2E7 1040 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 DAGLAQ9Y4D2 1042 aa23.65■■□□□ 1.38
SMN1-211ENST00000625245 TLR2O60603 784 aa23.64■■□□□ 1.37
SMN1-211ENST00000625245 ECM2O94769 699 aaPredicted RBP23.64■■□□□ 1.37
SMN1-211ENST00000625245 LDHBP07195 334 aaKnown RBP23.64■■□□□ 1.37
SMN1-211ENST00000625245 PRDX5P30044 214 aa23.64■■□□□ 1.37
SMN1-211ENST00000625245 CDC42EP5Q6NZY7 148 aa23.64■■□□□ 1.37
SMN1-211ENST00000625245 RPAP1Q9BWH6 1393 aaPredicted RBP23.64■■□□□ 1.37
SMN1-211ENST00000625245 CIAO1O76071 339 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
SMN1-211ENST00000625245 PPATQ06203 517 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.63■■□□□ 1.37
SMN1-211ENST00000625245 ZNF333Q96JL9 665 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 ARHGAP39Q9C0H5 1083 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 USP40Q9NVE5 1235 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 NOB1Q9ULX3 412 aaKnown RBP23.63■■□□□ 1.37
SMN1-211ENST00000625245 CENPFP49454 3210 aa23.63■■□□□ 1.37
SMN1-211ENST00000625245 ZSWIM8A7E2V4 1837 aa23.62■■□□□ 1.37
SMN1-211ENST00000625245 NFIAQ12857 509 aa23.62■■□□□ 1.37
SMN1-211ENST00000625245 SLC4A8Q2Y0W8 1093 aa23.62■■□□□ 1.37
SMN1-211ENST00000625245 ZCCHC17Q9NP64 241 aaKnown RBP23.62■■□□□ 1.37
SMN1-211ENST00000625245 FBXO3Q9UK99 471 aa23.62■■□□□ 1.37
SMN1-211ENST00000625245 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
SMN1-211ENST00000625245 GCC1Q96CN9 775 aa23.61■■□□□ 1.37
SMN1-211ENST00000625245 DENND2AQ9ULE3 1009 aa23.61■■□□□ 1.37
SMN1-211ENST00000625245 PA2G4Q9UQ80 394 aaKnown RBP23.61■■□□□ 1.37
SMN1-211ENST00000625245 PHKA1P46020 1223 aa23.6■■□□□ 1.37
SMN1-211ENST00000625245 LACTBP83111 547 aaPredicted RBP23.6■■□□□ 1.37
SMN1-211ENST00000625245 API5Q9BZZ5 524 aaKnown RBP23.6■■□□□ 1.37
SMN1-211ENST00000625245 HDAC5Q9UQL6 1122 aa23.6■■□□□ 1.37
SMN1-211ENST00000625245 MYH2Q9UKX2 1941 aa23.59■■□□□ 1.37
SMN1-211ENST00000625245 IL15P40933 162 aaPredicted RBP23.59■■□□□ 1.37
SMN1-211ENST00000625245 FAM198AQ9UFP1 575 aa23.59■■□□□ 1.37
SMN1-211ENST00000625245 CPA4Q9UI42 421 aa23.59■■□□□ 1.37
SMN1-211ENST00000625245 ZNF112Q9UJU3 913 aa23.59■■□□□ 1.37
SMN1-211ENST00000625245 ADORA1P30542 326 aa23.58■■□□□ 1.37
SMN1-211ENST00000625245 ZFPM1Q8IX07 1006 aa23.58■■□□□ 1.37
SMN1-211ENST00000625245 TRMT2AQ8IZ69 625 aaKnown RBP23.58■■□□□ 1.37
SMN1-211ENST00000625245 SH3TC2Q8TF17 1288 aa23.58■■□□□ 1.37
SMN1-211ENST00000625245 PDHXO00330 501 aa23.57■■□□□ 1.36
SMN1-211ENST00000625245 SEMA3EO15041 775 aa23.57■■□□□ 1.36
SMN1-211ENST00000625245 ANKRD23Q86SG2 305 aa23.57■■□□□ 1.36
SMN1-211ENST00000625245 SALL1Q9NSC2 1324 aa23.57■■□□□ 1.36
SMN1-211ENST00000625245 CT47B1P0C2W7 299 aaPredicted RBP23.56■■□□□ 1.36
SMN1-211ENST00000625245 C17orf99Q6UX52 265 aa23.56■■□□□ 1.36
SMN1-211ENST00000625245 MEIS3Q99687 375 aa23.56■■□□□ 1.36
SMN1-211ENST00000625245 KCNH4Q9UQ05 1017 aa23.56■■□□□ 1.36
SMN1-211ENST00000625245 MKI67P46013 3256 aaKnown RBP23.55■■□□□ 1.36
SMN1-211ENST00000625245 GNRH1P01148 92 aa23.55■■□□□ 1.36
SMN1-211ENST00000625245 TIMM10P62072 90 aa23.55■■□□□ 1.36
SMN1-211ENST00000625245 CCDC102BQ68D86 513 aa23.55■■□□□ 1.36
SMN1-211ENST00000625245 ZGPATQ8N5A5 531 aaKnown RBP23.55■■□□□ 1.36
SMN1-211ENST00000625245 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
SMN1-211ENST00000625245 ABCF2Q9UG63 623 aa23.55■■□□□ 1.36
SMN1-211ENST00000625245 PSMC4P43686 418 aa23.54■■□□□ 1.36
SMN1-211ENST00000625245 RGS3P49796 1198 aa23.54■■□□□ 1.36
SMN1-211ENST00000625245 PRMT2P55345 433 aa23.54■■□□□ 1.36
SMN1-211ENST00000625245 NOL9Q5SY16 702 aaKnown RBP23.54■■□□□ 1.36
SMN1-211ENST00000625245 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
SMN1-211ENST00000625245 ZSCAN29Q8IWY8 852 aaPredicted RBP23.54■■□□□ 1.36
SMN1-211ENST00000625245 FMNL1O95466 1100 aaPredicted RBP23.53■■□□□ 1.36
SMN1-211ENST00000625245 DOCK2Q92608 1830 aa23.52■■□□□ 1.36
SMN1-211ENST00000625245 CTGFP29279 349 aa23.52■■□□□ 1.36
SMN1-211ENST00000625245 HABP4Q5JVS0 413 aaKnown RBP23.52■■□□□ 1.36
SMN1-211ENST00000625245 TRIM47Q96LD4 638 aa23.52■■□□□ 1.36
SMN1-211ENST00000625245 CXCL11O14625 94 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 ENTPD3O75355 529 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 HOXD10P28358 340 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 MOGSQ13724 837 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 RASGRF1Q13972 1273 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 SLF2Q8IX21 1173 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 IDI2Q9BXS1 227 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 PICK1Q9NRD5 415 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 SRRDQ9UH36 339 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 ZHX2Q9Y6X8 837 aa23.51■■□□□ 1.35
SMN1-211ENST00000625245 BRCA2P51587 3418 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 A0A1B0GUL7 405 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 SRGAP3O43295 1099 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
SMN1-211ENST00000625245 TFCP2Q12800 502 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 PICALMQ13492 652 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 SPTY2D1Q68D10 685 aaPredicted RBP23.5■■□□□ 1.35
SMN1-211ENST00000625245 RAET1EQ8TD07 263 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 XAGE2Q96GT9 111 aa23.5■■□□□ 1.35
SMN1-211ENST00000625245 PARK7Q99497 189 aaKnown RBP23.5■■□□□ 1.35
SMN1-211ENST00000625245 AKAP2Q9Y2D5 859 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms