RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 AOC2O75106 756 aa17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 BTDP43251 543 aa17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 AIDAQ96BJ3 306 aa17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 TMEM39BQ9GZU3 492 aa17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
PCDHGC3-208ENST00000622836 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 GAKO14976 1311 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 MAP2K1Q02750 393 aaPredicted RBP17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 NOGQ13253 232 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 FAM83AQ86UY5 434 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 BEGAINQ9BUH8 593 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 DCTPP1Q9H773 170 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
PCDHGC3-208ENST00000622836 PCNTO95613 3336 aa17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 MAP2K2P36507 400 aa17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 TCP10Q12799 353 aa17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
PCDHGC3-208ENST00000622836 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-208ENST00000622836 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
PCDHGC3-208ENST00000622836 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-208ENST00000622836 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
PCDHGC3-208ENST00000622836 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
PCDHGC3-208ENST00000622836 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 SLC10A3P09131 477 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 NFIAQ12857 509 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 AAMPQ13685 434 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 FAM151AQ8WW52 585 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
PCDHGC3-208ENST00000622836 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 BAG3O95817 575 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 RGS3P49796 1198 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 PICALMQ13492 652 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
PCDHGC3-208ENST00000622836 IGSF3O75054 1194 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 KIF23Q02241 960 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAP3K11Q16584 847 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 LDLRAD1Q5T700 205 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 DCAF15Q66K64 600 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 SLC10A4Q96EP9 437 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 BOLA2Q9H3K6 86 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 ANTXR1Q9H6X2 564 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 WBP1LQ9NX94 342 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
PCDHGC3-208ENST00000622836 AK9Q5TCS8 1911 aa17■□□□□ 0.31
PCDHGC3-208ENST00000622836 GOLIM4O00461 696 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 ENTPD3O75355 529 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 CYP7A1P22680 504 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 ZIC5Q96T25 663 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAST2Q6P0Q8 1798 aa16.99■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 PLCG2P16885 1265 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 ATP5JP18859 108 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 CLMNQ96JQ2 1002 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 ECHDC1Q9NTX5 307 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 CSADQ9Y600 493 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 THSD7BQ9C0I4 1608 aa16.98■□□□□ 0.31
PCDHGC3-208ENST00000622836 UNCXA6NJT0 531 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 FOXN1O15353 648 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 WDHD1O75717 1129 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 RHBDL3P58872 404 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 ZFPM1Q8IX07 1006 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 GCC1Q96CN9 775 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 CSRNP1Q96S65 589 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
PCDHGC3-208ENST00000622836 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 MAP3K9P80192 1104 aa16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 ANKRD45Q5TZF3 282 aa16.96■□□□□ 0.31
PCDHGC3-208ENST00000622836 ADGRA1Q86SQ6 560 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms