RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 SCARF1Q14162 830 aa13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
RABGAP1-213ENST00000616002 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 MX1P20591 662 aa13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 POLA2Q14181 598 aa13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
RABGAP1-213ENST00000616002 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 CCDC183Q5T5S1 534 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 ZNF609O15014 1411 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 XDHP47989 1333 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 PDE8AO60658 829 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 HSPA4P34932 840 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 MYD88Q99836 296 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
RABGAP1-213ENST00000616002 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 PAPPA2Q9BXP8 1791 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 SEMA3EO15041 775 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 FLIIQ13045 1269 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
RABGAP1-213ENST00000616002 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 UBE2HP62256 183 aa13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 GMLQ99445 158 aa13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
RABGAP1-213ENST00000616002 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 JARID2Q92833 1246 aaPredicted RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 PSME4Q14997 1843 aa13.12□□□□□ -0.31
RABGAP1-213ENST00000616002 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 CDC5LQ99459 802 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 HPS5Q9UPZ3 1129 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 TNRC18O15417 2968 aaPredicted RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 NF2P35240 595 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
RABGAP1-213ENST00000616002 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 ZNF296Q8WUU4 475 aaPredicted RBP13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 FBXW7Q969H0 707 aa13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 TTC14Q96N46 770 aa13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
RABGAP1-213ENST00000616002 RAD50Q92878 1312 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 MED23Q9ULK4 1368 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 KDM4AO75164 1064 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 CTSWP56202 376 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 KCNB2Q92953 911 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 TM6SF1Q9BZW5 370 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 PRDM4Q9UKN5 801 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
RABGAP1-213ENST00000616002 SGSM2O43147 1006 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 FUCA2Q9BTY2 467 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 DIAPH3Q9NSV4 1193 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 MINPP1Q9UNW1 487 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 CCDC171Q6TFL3 1326 aa13.08□□□□□ -0.32
RABGAP1-213ENST00000616002 WTIPA6NIX2 430 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms