RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.22■□□□□ 0.99
CCL3-204ENST00000613922 TESPA1A2RU30 521 aaPredicted RBP21.21■□□□□ 0.99
CCL3-204ENST00000613922 POLA2Q14181 598 aa21.21■□□□□ 0.99
CCL3-204ENST00000613922 MVPQ14764 893 aaKnown RBP21.21■□□□□ 0.99
CCL3-204ENST00000613922 CDC42EP5Q6NZY7 148 aa21.21■□□□□ 0.99
CCL3-204ENST00000613922 R3HDMLQ9H3Y0 253 aa21.21■□□□□ 0.99
CCL3-204ENST00000613922 ELP3Q9H9T3 547 aa21.21■□□□□ 0.99
CCL3-204ENST00000613922 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCL3-204ENST00000613922 RLBP1P12271 317 aa21.2■□□□□ 0.98
CCL3-204ENST00000613922 G3BP1Q13283 466 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCL3-204ENST00000613922 VGLL4Q14135 290 aa21.2■□□□□ 0.98
CCL3-204ENST00000613922 FTSJ3Q8IY81 847 aaKnown RBP21.2■□□□□ 0.98
CCL3-204ENST00000613922 FAM151AQ8WW52 585 aa21.2■□□□□ 0.98
CCL3-204ENST00000613922 OPTNQ96CV9 577 aa21.2■□□□□ 0.98
CCL3-204ENST00000613922 HOOK2Q96ED9 719 aa21.2■□□□□ 0.98
CCL3-204ENST00000613922 ATP8B2P98198 1209 aa21.19■□□□□ 0.98
CCL3-204ENST00000613922 SSH3Q8TE77 659 aa21.19■□□□□ 0.98
CCL3-204ENST00000613922 GAKO14976 1311 aa21.19■□□□□ 0.98
CCL3-204ENST00000613922 MS4A4AQ96JQ5 239 aa21.18■□□□□ 0.98
CCL3-204ENST00000613922 NEUROD6Q96NK8 337 aa21.18■□□□□ 0.98
CCL3-204ENST00000613922 CSADQ9Y600 493 aa21.18■□□□□ 0.98
CCL3-204ENST00000613922 DOCK2Q92608 1830 aa21.18■□□□□ 0.98
CCL3-204ENST00000613922 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
CCL3-204ENST00000613922 FKTNO75072 461 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 RGS19P49795 217 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 NFIAQ12857 509 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 DCAF15Q66K64 600 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 ITPRIPQ8IWB1 547 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 CNKSR2Q8WXI2 1034 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 FAM163AQ96GL9 167 aaPredicted RBP21.17■□□□□ 0.98
CCL3-204ENST00000613922 PTPN18Q99952 460 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 USP40Q9NVE5 1235 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 FAM198AQ9UFP1 575 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 SNCAIPQ9Y6H5 919 aa21.17■□□□□ 0.98
CCL3-204ENST00000613922 RFX7Q2KHR2 1363 aa21.16■□□□□ 0.98
CCL3-204ENST00000613922 ARID4AP29374 1257 aaPredicted RBP21.16■□□□□ 0.98
CCL3-204ENST00000613922 PKN2Q16513 984 aaKnown RBP21.16■□□□□ 0.98
CCL3-204ENST00000613922 SPTY2D1Q68D10 685 aaPredicted RBP21.16■□□□□ 0.98
CCL3-204ENST00000613922 OTUD7BQ6GQQ9 843 aa21.16■□□□□ 0.98
CCL3-204ENST00000613922 WRNIP1Q96S55 665 aa21.16■□□□□ 0.98
CCL3-204ENST00000613922 GPR108Q9NPR9 543 aa21.16■□□□□ 0.98
CCL3-204ENST00000613922 SPDYE5A6NIY4 337 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 DZIP1Q86YF9 867 aaKnown RBP21.15■□□□□ 0.98
CCL3-204ENST00000613922 SLF2Q8IX21 1173 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 ZNF341Q9BYN7 854 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 C1orf115Q9H7X2 142 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 HMG20BQ9P0W2 317 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 ABCF2Q9UG63 623 aa21.15■□□□□ 0.98
CCL3-204ENST00000613922 GTF2A2P52657 109 aa21.14■□□□□ 0.97
CCL3-204ENST00000613922 TCP10Q12799 353 aa21.14■□□□□ 0.97
CCL3-204ENST00000613922 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
CCL3-204ENST00000613922 IDI2Q9BXS1 227 aa21.14■□□□□ 0.97
CCL3-204ENST00000613922 ZNF112Q9UJU3 913 aa21.14■□□□□ 0.97
CCL3-204ENST00000613922 NOP58Q9Y2X3 529 aaKnown RBP21.14■□□□□ 0.97
CCL3-204ENST00000613922 GORABQ5T7V8 394 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 MIGA2Q7L4E1 593 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 ERO1BQ86YB8 467 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 BRI3BPQ8WY22 251 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 ZKSCAN4Q969J2 545 aaPredicted RBP21.13■□□□□ 0.97
CCL3-204ENST00000613922 OTUD5Q96G74 571 aa21.13■□□□□ 0.97
CCL3-204ENST00000613922 MYO5AQ9Y4I1 1855 aaKnown RBP21.13■□□□□ 0.97
CCL3-204ENST00000613922 MROH7-TTC4A0A0A0MT08 1334 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 ENTPD3O75355 529 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 MCAMP43121 646 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 MECOMQ03112 1051 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 CRHR2Q13324 411 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 TNNI3KQ59H18 835 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 PI16Q6UXB8 463 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 ZFPM1Q8IX07 1006 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 ZNF384Q8TF68 577 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 FPGT-TNNI3KV9GXZ4 949 aa21.12■□□□□ 0.97
CCL3-204ENST00000613922 ATRNL1Q5VV63 1379 aa21.11■□□□□ 0.97
CCL3-204ENST00000613922 CCL15-CCL14A0A0B4J2E2 113 aa21.11■□□□□ 0.97
CCL3-204ENST00000613922 SURF6O75683 361 aaKnown RBP21.11■□□□□ 0.97
CCL3-204ENST00000613922 INPP5BP32019 993 aa21.11■□□□□ 0.97
CCL3-204ENST00000613922 RGS3P49796 1198 aa21.11■□□□□ 0.97
CCL3-204ENST00000613922 CCL15Q16663 113 aa21.11■□□□□ 0.97
CCL3-204ENST00000613922 MAST2Q6P0Q8 1798 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 GPR75-ASB3A0A0A6YYF3 556 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 WDHD1O75717 1129 aaPredicted RBP21.1■□□□□ 0.97
CCL3-204ENST00000613922 BTDP43251 543 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 PPIL2Q13356 520 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 FBXO46Q6PJ61 603 aaPredicted RBP21.1■□□□□ 0.97
CCL3-204ENST00000613922 PANK1Q8TE04 598 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 NSUN4Q96CB9 384 aaKnown RBP21.1■□□□□ 0.97
CCL3-204ENST00000613922 HPS5Q9UPZ3 1129 aa21.1■□□□□ 0.97
CCL3-204ENST00000613922 IRF6O14896 467 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 RHBDL3P58872 404 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 PPATQ06203 517 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 OS9Q13438 667 aaPredicted RBP21.09■□□□□ 0.97
CCL3-204ENST00000613922 NOL9Q5SY16 702 aaKnown RBP21.09■□□□□ 0.97
CCL3-204ENST00000613922 CEP85Q6P2H3 762 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 TBC1D9Q6ZT07 1266 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 DBNDD2Q9BQY9 259 aa21.09■□□□□ 0.97
CCL3-204ENST00000613922 CETPP11597 493 aa21.08■□□□□ 0.97
CCL3-204ENST00000613922 GSTO1P78417 241 aa21.08■□□□□ 0.97
CCL3-204ENST00000613922 SH3BP5LQ7L8J4 393 aa21.08■□□□□ 0.97
CCL3-204ENST00000613922 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms