RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 LRP2BPQ9P2M1 347 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 LDHCP07864 332 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
SENP3-209ENST00000610454 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 USP40Q9NVE5 1235 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
SENP3-209ENST00000610454 UNCXA6NJT0 531 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 RAB11FIP3O75154 756 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 LBX1P52954 281 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SENP3-209ENST00000610454 MECOMQ03112 1051 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 CDC42EP5Q6NZY7 148 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 ANKRD13AQ8IZ07 590 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 EAF2Q96CJ1 260 aaPredicted RBP16.39■□□□□ 0.21
SENP3-209ENST00000610454 NOL10Q9BSC4 688 aaKnown RBP16.39■□□□□ 0.21
SENP3-209ENST00000610454 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
SENP3-209ENST00000610454 MROH7-TTC4A0A0A0MT08 1334 aa16.39■□□□□ 0.21
SENP3-209ENST00000610454 HSPA8P11142 646 aaKnown RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 TCP10Q12799 353 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 DCAF15Q66K64 600 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 ZNF512BQ96KM6 892 aaPredicted RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 TEPSINQ96N21 525 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 GAKO14976 1311 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 MAST2Q6P0Q8 1798 aa16.38■□□□□ 0.21
SENP3-209ENST00000610454 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
SENP3-209ENST00000610454 IFIT2P09913 472 aaKnown RBP16.37■□□□□ 0.21
SENP3-209ENST00000610454 BTDP43251 543 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 SREBF2Q12772 1141 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 FAM151AQ8WW52 585 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 FAM163AQ96GL9 167 aaPredicted RBP16.37■□□□□ 0.21
SENP3-209ENST00000610454 CSADQ9Y600 493 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 OTOFQ9HC10 1997 aa16.37■□□□□ 0.21
SENP3-209ENST00000610454 USP2O75604 605 aaPredicted RBP16.36■□□□□ 0.21
SENP3-209ENST00000610454 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
SENP3-209ENST00000610454 CDAN1Q8IWY9 1227 aa16.36■□□□□ 0.21
SENP3-209ENST00000610454 TNS4Q8IZW8 715 aa16.36■□□□□ 0.21
SENP3-209ENST00000610454 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
SENP3-209ENST00000610454 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SENP3-209ENST00000610454 ZAP70P43403 619 aa16.35■□□□□ 0.21
SENP3-209ENST00000610454 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
SENP3-209ENST00000610454 ZSCAN29Q8IWY8 852 aaPredicted RBP16.35■□□□□ 0.21
SENP3-209ENST00000610454 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
SENP3-209ENST00000610454 CLMNQ96JQ2 1002 aa16.35■□□□□ 0.21
SENP3-209ENST00000610454 CSRNP1Q96S65 589 aa16.35■□□□□ 0.21
SENP3-209ENST00000610454 SAGE1Q9NXZ1 904 aa16.35■□□□□ 0.21
SENP3-209ENST00000610454 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 IGSF3O75054 1194 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 ENTPD3O75355 529 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 TRPA1O75762 1119 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 BAG3O95817 575 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 RGS3P49796 1198 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 NFIAQ12857 509 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 PICALMQ13492 652 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 WNK4Q96J92 1243 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 WRNIP1Q96S55 665 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 ELP3Q9H9T3 547 aa16.34■□□□□ 0.21
SENP3-209ENST00000610454 DOCK2Q92608 1830 aa16.33■□□□□ 0.21
SENP3-209ENST00000610454 MANSC4A6NHS7 340 aaPredicted RBP16.33■□□□□ 0.2
SENP3-209ENST00000610454 IDH1O75874 414 aaKnown RBP16.33■□□□□ 0.2
SENP3-209ENST00000610454 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.2
SENP3-209ENST00000610454 CYP2E1P05181 493 aaPredicted RBP16.33■□□□□ 0.2
SENP3-209ENST00000610454 MAP3K9P80192 1104 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 FAM198AQ9UFP1 575 aa16.33■□□□□ 0.2
SENP3-209ENST00000610454 PLCG2P16885 1265 aa16.32■□□□□ 0.2
SENP3-209ENST00000610454 MAP3K12Q12852 859 aa16.32■□□□□ 0.2
SENP3-209ENST00000610454 VGLL4Q14135 290 aa16.32■□□□□ 0.2
SENP3-209ENST00000610454 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
SENP3-209ENST00000610454 MIGA2Q7L4E1 593 aa16.32■□□□□ 0.2
SENP3-209ENST00000610454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.32■□□□□ 0.26e-19■■■■□ 20.2
SENP3-209ENST00000610454 MYO5AQ9Y4I1 1855 aaKnown RBP16.32■□□□□ 0.2
SENP3-209ENST00000610454 TM4SF4P48230 202 aa16.31■□□□□ 0.2
SENP3-209ENST00000610454 INHBEP58166 350 aa16.31■□□□□ 0.2
SENP3-209ENST00000610454 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
SENP3-209ENST00000610454 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
SENP3-209ENST00000610454 OPTNQ96CV9 577 aa16.31■□□□□ 0.2
SENP3-209ENST00000610454 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
SENP3-209ENST00000610454 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
SENP3-209ENST00000610454 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
SENP3-209ENST00000610454 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms