RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HABP4Q5JVS0 413 aaKnown RBP22.22■■□□□ 1.15
SHKBP1-227ENST00000602011 TRMT2AQ8IZ69 625 aaKnown RBP22.22■■□□□ 1.15
SHKBP1-227ENST00000602011 FAM151AQ8WW52 585 aa22.22■■□□□ 1.15
SHKBP1-227ENST00000602011 API5Q9BZZ5 524 aaKnown RBP22.22■■□□□ 1.15
SHKBP1-227ENST00000602011 RPAP1Q9BWH6 1393 aaPredicted RBP22.22■■□□□ 1.15
SHKBP1-227ENST00000602011 MYCP01106 439 aaPredicted RBP22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 PPATQ06203 517 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 FAM43AQ8N2R8 423 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 GCC1Q96CN9 775 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 OTUD5Q96G74 571 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 WRNIP1Q96S55 665 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 ZNF341Q9BYN7 854 aa22.21■■□□□ 1.15
SHKBP1-227ENST00000602011 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 PPIL2Q13356 520 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 KIF22Q14807 665 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 ATG9AQ7Z3C6 839 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 PTCH2Q9Y6C5 1203 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 ARAP2Q8WZ64 1704 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 RBBP6Q7Z6E9 1792 aaKnown RBP22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 ZSWIM8A7E2V4 1837 aa22.2■■□□□ 1.14
SHKBP1-227ENST00000602011 TLR2O60603 784 aa22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 ECM2O94769 699 aaPredicted RBP22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 ZGPATQ8N5A5 531 aaKnown RBP22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 TMEM106CQ9BVX2 250 aa22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 DENND2AQ9ULE3 1009 aa22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 SNCAIPQ9Y6H5 919 aa22.19■■□□□ 1.14
SHKBP1-227ENST00000602011 SALL1Q9NSC2 1324 aa22.18■■□□□ 1.14
SHKBP1-227ENST00000602011 PRMT2P55345 433 aa22.18■■□□□ 1.14
SHKBP1-227ENST00000602011 ATP2B3Q16720 1220 aa22.18■■□□□ 1.14
SHKBP1-227ENST00000602011 ZNF333Q96JL9 665 aa22.18■■□□□ 1.14
SHKBP1-227ENST00000602011 ARHGAP39Q9C0H5 1083 aa22.18■■□□□ 1.14
SHKBP1-227ENST00000602011 LDHBP07195 334 aaKnown RBP22.17■■□□□ 1.14
SHKBP1-227ENST00000602011 ZNF112Q9UJU3 913 aa22.17■■□□□ 1.14
SHKBP1-227ENST00000602011 IRF6O14896 467 aa22.16■■□□□ 1.14
SHKBP1-227ENST00000602011 SLF2Q8IX21 1173 aa22.16■■□□□ 1.14
SHKBP1-227ENST00000602011 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
SHKBP1-227ENST00000602011 ZKSCAN4Q969J2 545 aaPredicted RBP22.16■■□□□ 1.14
SHKBP1-227ENST00000602011 COPRSQ9NQ92 184 aa22.16■■□□□ 1.14
SHKBP1-227ENST00000602011 SLC9C1Q4G0N8 1177 aa22.15■■□□□ 1.14
SHKBP1-227ENST00000602011 NOB1Q9ULX3 412 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-227ENST00000602011 BTBD19C9JJ37 291 aa22.14■■□□□ 1.13
SHKBP1-227ENST00000602011 CDC42EP5Q6NZY7 148 aa22.14■■□□□ 1.13
SHKBP1-227ENST00000602011 SH3TC2Q8TF17 1288 aa22.14■■□□□ 1.13
SHKBP1-227ENST00000602011 CDCA7LQ96GN5 454 aa22.14■■□□□ 1.13
SHKBP1-227ENST00000602011 DAGLAQ9Y4D2 1042 aa22.14■■□□□ 1.13
SHKBP1-227ENST00000602011 NOL9Q5SY16 702 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 SPTY2D1Q68D10 685 aaPredicted RBP22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 ANKRD23Q86SG2 305 aa22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 USP40Q9NVE5 1235 aa22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 KCNH4Q9UQ05 1017 aa22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 AKAP2Q9Y2D5 859 aa22.13■■□□□ 1.13
SHKBP1-227ENST00000602011 PDS5AQ29RF7 1337 aaKnown RBP22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 GNAI3P08754 354 aa22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 HOXD10P28358 340 aa22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 SLC4A8Q2Y0W8 1093 aa22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 MIGA2Q7L4E1 593 aa22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 FAM163AQ96GL9 167 aaPredicted RBP22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 SIL1Q9H173 461 aa22.12■■□□□ 1.13
SHKBP1-227ENST00000602011 CXCL11O14625 94 aa22.11■■□□□ 1.13
SHKBP1-227ENST00000602011 ENTPD3O75355 529 aa22.11■■□□□ 1.13
SHKBP1-227ENST00000602011 PRDX5P30044 214 aa22.11■■□□□ 1.13
SHKBP1-227ENST00000602011 LACTBP83111 547 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-227ENST00000602011 IDI2Q9BXS1 227 aa22.11■■□□□ 1.13
SHKBP1-227ENST00000602011 C17orf99Q6UX52 265 aa22.1■■□□□ 1.13
SHKBP1-227ENST00000602011 LRRFIP2Q9Y608 721 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-227ENST00000602011 IPO8O15397 1037 aaKnown RBP22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 MAP4K4O95819 1239 aaPredicted RBP22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 INPP5BP32019 993 aa22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 FXR1P51114 621 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 TCP10Q12799 353 aa22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 DIXDC1Q155Q3 683 aa22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 CCDC102BQ68D86 513 aa22.09■■□□□ 1.13
SHKBP1-227ENST00000602011 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 CTGFP29279 349 aa22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 PHKA1P46020 1223 aa22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 FAM198AQ9UFP1 575 aa22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 COLQQ9Y215 455 aaPredicted RBP22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 CEP290O15078 2479 aa22.08■■□□□ 1.13
SHKBP1-227ENST00000602011 PDHXO00330 501 aa22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 RARSP54136 660 aaKnown RBP22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 MAP3K10Q02779 954 aa22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 NFIAQ12857 509 aa22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 MTX1Q13505 466 aa22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 MVPQ14764 893 aaKnown RBP22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 FASTKD5Q7L8L6 764 aaKnown RBP22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 CPA4Q9UI42 421 aa22.07■■□□□ 1.12
SHKBP1-227ENST00000602011 GAKO14976 1311 aa22.06■■□□□ 1.12
SHKBP1-227ENST00000602011 NPM3O75607 178 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-227ENST00000602011 DZIP1Q86YF9 867 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-227ENST00000602011 PARK7Q99497 189 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-227ENST00000602011 PICK1Q9NRD5 415 aa22.06■■□□□ 1.12
SHKBP1-227ENST00000602011 MTFR1Q15390 333 aa22.05■■□□□ 1.12
SHKBP1-227ENST00000602011 H0YGN5 161 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 SRGAP3O43295 1099 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 LDHCP07864 332 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 CAPN2P17655 700 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 TIMM10P62072 90 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 SCYL3Q8IZE3 742 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 MEIS3Q99687 375 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms