RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 OTOFQ9HC10 1997 aa15.63■□□□□ 0.09
USE1-209ENST00000601592 MROH7-TTC4A0A0A0MT08 1334 aa15.63■□□□□ 0.09
USE1-209ENST00000601592 WDR33Q9C0J8 1336 aaKnown RBP15.63■□□□□ 0.09
USE1-209ENST00000601592 UBE2Q2LH0YL09 131 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 LDHCP07864 332 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 BTDP43251 543 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 TCP10Q12799 353 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 NAA16Q6N069 864 aaPredicted RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 ARMC9Q7Z3E5 817 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 DNAJC2Q99543 621 aaKnown RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 PIH1D3Q9NQM4 214 aaKnown RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 ZBTB47Q9UFB7 747 aaPredicted RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 ANGEL1Q9UNK9 670 aaKnown RBP15.62■□□□□ 0.09
USE1-209ENST00000601592 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 CDK5RAP2Q96SN8 1893 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 GAKO14976 1311 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
USE1-209ENST00000601592 ZNF157P51786 506 aaPredicted RBP15.61■□□□□ 0.09
USE1-209ENST00000601592 FKBP1BP68106 108 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 RGMBQ6NW40 437 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 CDAN1Q8IWY9 1227 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 NSUN4Q96CB9 384 aaKnown RBP15.61■□□□□ 0.09
USE1-209ENST00000601592 HHIPL1Q96JK4 782 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
USE1-209ENST00000601592 PPP1R12BO60237 982 aaPredicted RBP15.6■□□□□ 0.09
USE1-209ENST00000601592 AOC2O75106 756 aa15.6■□□□□ 0.09
USE1-209ENST00000601592 AAMPQ13685 434 aa15.6■□□□□ 0.09
USE1-209ENST00000601592 ZNF384Q8TF68 577 aa15.6■□□□□ 0.09
USE1-209ENST00000601592 BOLA2Q9H3K6 86 aa15.6■□□□□ 0.09
USE1-209ENST00000601592 ANTXR1Q9H6X2 564 aa15.6■□□□□ 0.09
USE1-209ENST00000601592 GOLIM4O00461 696 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 NFIAQ12857 509 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 FKBP1CQ5VVH2 108 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 FAM83AQ86UY5 434 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 FAM163AQ96GL9 167 aaPredicted RBP15.59■□□□□ 0.09
USE1-209ENST00000601592 GPATCH3Q96I76 525 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
USE1-209ENST00000601592 CYP7A1P22680 504 aa15.58■□□□□ 0.08
USE1-209ENST00000601592 RGS3P49796 1198 aa15.58■□□□□ 0.08
USE1-209ENST00000601592 MAP3K12Q12852 859 aa15.58■□□□□ 0.08
USE1-209ENST00000601592 PICALMQ13492 652 aa15.58■□□□□ 0.08
USE1-209ENST00000601592 TTF1Q15361 905 aaPredicted RBP15.58■□□□□ 0.08
USE1-209ENST00000601592 ZSCAN29Q8IWY8 852 aaPredicted RBP15.58■□□□□ 0.08
USE1-209ENST00000601592 TEPSINQ96N21 525 aa15.58■□□□□ 0.08
USE1-209ENST00000601592 AATFQ9NY61 560 aaKnown RBP eCLIP15.58■□□□□ 0.08
USE1-209ENST00000601592 GPR75-ASB3A0A0A6YYF3 556 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 HSPA1AP0DMV8 641 aaKnown RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 HSPA1BP0DMV9 641 aaKnown RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 ATP5JP18859 108 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 IREB2P48200 963 aaKnown RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 HDAC1Q13547 482 aaPredicted RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 MAGEB6Q8N7X4 407 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
USE1-209ENST00000601592 FAM151AQ8WW52 585 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 CCDC102AQ96A19 550 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 EDC3Q96F86 508 aaKnown RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 FAM198AQ9UFP1 575 aa15.57■□□□□ 0.08
USE1-209ENST00000601592 RPAP1Q9BWH6 1393 aaPredicted RBP15.57■□□□□ 0.08
USE1-209ENST00000601592 PCNTO95613 3336 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 BAG3O95817 575 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 MKRN3Q13064 507 aaKnown RBP15.56■□□□□ 0.08
USE1-209ENST00000601592 NOGQ13253 232 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 TSHZ3Q63HK5 1081 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 RASAL3Q86YV0 1011 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 TEX11Q8IYF3 940 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 GCC1Q96CN9 775 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 HOOK2Q96ED9 719 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 RWDD1Q9H446 243 aaPredicted RBP15.56■□□□□ 0.08
USE1-209ENST00000601592 ECHDC1Q9NTX5 307 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 PAG1Q9NWQ8 432 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 MYH1P12882 1939 aa15.56■□□□□ 0.08
USE1-209ENST00000601592 SLC10A3P09131 477 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 PLCG2P16885 1265 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 RHBDL3P58872 404 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 ADGRA1Q86SQ6 560 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 ZFPM1Q8IX07 1006 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 MIGA1Q8NAN2 632 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
USE1-209ENST00000601592 AIDAQ96BJ3 306 aa15.55■□□□□ 0.08
USE1-209ENST00000601592 RFX7Q2KHR2 1363 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 FAM155AB1AL88 458 aaPredicted RBP15.54■□□□□ 0.08
USE1-209ENST00000601592 ENTPD3O75355 529 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 USP2O75604 605 aaPredicted RBP15.54■□□□□ 0.08
USE1-209ENST00000601592 WDHD1O75717 1129 aaPredicted RBP15.54■□□□□ 0.08
USE1-209ENST00000601592 MAP2K2P36507 400 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 DCAF15Q66K64 600 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 B4GALNT3Q6L9W6 998 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 MIGA2Q7L4E1 593 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 SLC10A4Q96EP9 437 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 CLMNQ96JQ2 1002 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 HAUS7Q99871 368 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 BEGAINQ9BUH8 593 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 IDI2Q9BXS1 227 aa15.54■□□□□ 0.08
USE1-209ENST00000601592 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms