RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 POTEFA5A3E0 1075 aa21.22■□□□□ 0.99
PNKP-210ENST00000597965 PRMT2P55345 433 aa21.22■□□□□ 0.99
PNKP-210ENST00000597965 PPATQ06203 517 aa21.22■□□□□ 0.99
PNKP-210ENST00000597965 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
PNKP-210ENST00000597965 IRF6O14896 467 aa21.21■□□□□ 0.99
PNKP-210ENST00000597965 CIAO1O76071 339 aa21.21■□□□□ 0.99
PNKP-210ENST00000597965 UBTFL1P0CB47 393 aaPredicted RBP21.21■□□□□ 0.99
PNKP-210ENST00000597965 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
PNKP-210ENST00000597965 ZKSCAN4Q969J2 545 aaPredicted RBP21.21■□□□□ 0.99
PNKP-210ENST00000597965 ZNF333Q96JL9 665 aa21.21■□□□□ 0.99
PNKP-210ENST00000597965 SEMA3EO15041 775 aa21.2■□□□□ 0.98
PNKP-210ENST00000597965 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
PNKP-210ENST00000597965 SLFN5Q08AF3 891 aa21.2■□□□□ 0.98
PNKP-210ENST00000597965 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.98
PNKP-210ENST00000597965 CEP126Q9P2H0 1117 aa21.2■□□□□ 0.98
PNKP-210ENST00000597965 LDHBP07195 334 aaKnown RBP21.19■□□□□ 0.98
PNKP-210ENST00000597965 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
PNKP-210ENST00000597965 LACTBP83111 547 aaPredicted RBP21.19■□□□□ 0.98
PNKP-210ENST00000597965 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
PNKP-210ENST00000597965 BTBD19C9JJ37 291 aa21.18■□□□□ 0.98
PNKP-210ENST00000597965 ATP2B3Q16720 1220 aa21.18■□□□□ 0.98
PNKP-210ENST00000597965 SLC4A8Q2Y0W8 1093 aa21.18■□□□□ 0.98
PNKP-210ENST00000597965 DENND2AQ9ULE3 1009 aa21.18■□□□□ 0.98
PNKP-210ENST00000597965 PTCH2Q9Y6C5 1203 aa21.18■□□□□ 0.98
PNKP-210ENST00000597965 IL15P40933 162 aaPredicted RBP21.17■□□□□ 0.98
PNKP-210ENST00000597965 MIGA2Q7L4E1 593 aa21.17■□□□□ 0.98
PNKP-210ENST00000597965 DAGLAQ9Y4D2 1042 aa21.17■□□□□ 0.98
PNKP-210ENST00000597965 SALL1Q9NSC2 1324 aa21.17■□□□□ 0.98
PNKP-210ENST00000597965 AK9Q5TCS8 1911 aa21.17■□□□□ 0.98
PNKP-210ENST00000597965 MKI67P46013 3256 aaKnown RBP21.17■□□□□ 0.98
PNKP-210ENST00000597965 ZBTB22O15209 634 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 EN2P19622 333 aaPredicted RBP21.16■□□□□ 0.98
PNKP-210ENST00000597965 HOXD10P28358 340 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 ATG9AQ7Z3C6 839 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 ANKRD23Q86SG2 305 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 SLF2Q8IX21 1173 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 ZNF112Q9UJU3 913 aa21.16■□□□□ 0.98
PNKP-210ENST00000597965 TCP10Q12799 353 aa21.15■□□□□ 0.98
PNKP-210ENST00000597965 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
PNKP-210ENST00000597965 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
PNKP-210ENST00000597965 BRCA2P51587 3418 aa21.15■□□□□ 0.98
PNKP-210ENST00000597965 NOL9Q5SY16 702 aaKnown RBP21.14■□□□□ 0.97
PNKP-210ENST00000597965 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.14■□□□□ 0.97
PNKP-210ENST00000597965 SIL1Q9H173 461 aa21.14■□□□□ 0.97
PNKP-210ENST00000597965 KCNH4Q9UQ05 1017 aa21.14■□□□□ 0.97
PNKP-210ENST00000597965 PRDX5P30044 214 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 INPP5BP32019 993 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 CAP1Q01518 475 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 DIXDC1Q155Q3 683 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 C17orf99Q6UX52 265 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 USP40Q9NVE5 1235 aa21.13■□□□□ 0.97
PNKP-210ENST00000597965 PDHXO00330 501 aa21.12■□□□□ 0.97
PNKP-210ENST00000597965 CXCL11O14625 94 aa21.12■□□□□ 0.97
PNKP-210ENST00000597965 PARK7Q99497 189 aaKnown RBP21.12■□□□□ 0.97
PNKP-210ENST00000597965 ENTPD3O75355 529 aa21.11■□□□□ 0.97
PNKP-210ENST00000597965 HABP4Q5JVS0 413 aaKnown RBP21.11■□□□□ 0.97
PNKP-210ENST00000597965 SPTY2D1Q68D10 685 aaPredicted RBP21.11■□□□□ 0.97
PNKP-210ENST00000597965 PICK1Q9NRD5 415 aa21.11■□□□□ 0.97
PNKP-210ENST00000597965 NOB1Q9ULX3 412 aaKnown RBP21.11■□□□□ 0.97
PNKP-210ENST00000597965 AKAP2Q9Y2D5 859 aa21.11■□□□□ 0.97
PNKP-210ENST00000597965 PDS5AQ29RF7 1337 aaKnown RBP21.1■□□□□ 0.97
PNKP-210ENST00000597965 NFIAQ12857 509 aa21.1■□□□□ 0.97
PNKP-210ENST00000597965 FASTKD5Q7L8L6 764 aaKnown RBP21.1■□□□□ 0.97
PNKP-210ENST00000597965 DZIP1Q86YF9 867 aaKnown RBP21.1■□□□□ 0.97
PNKP-210ENST00000597965 NKX2-3Q8TAU0 364 aa21.1■□□□□ 0.97
PNKP-210ENST00000597965 IDI2Q9BXS1 227 aa21.1■□□□□ 0.97
PNKP-210ENST00000597965 COPRSQ9NQ92 184 aa21.1■□□□□ 0.97
PNKP-210ENST00000597965 SRRDQ9UH36 339 aa21.1■□□□□ 0.97
PNKP-210ENST00000597965 FMNL1O95466 1100 aaPredicted RBP21.09■□□□□ 0.97
PNKP-210ENST00000597965 PSMC4P43686 418 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 CCDC102BQ68D86 513 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 TRMT2AQ8IZ69 625 aaKnown RBP21.09■□□□□ 0.97
PNKP-210ENST00000597965 RAET1EQ8TD07 263 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 SH3TC2Q8TF17 1288 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 ARHGAP39Q9C0H5 1083 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 FAM198AQ9UFP1 575 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 CPA4Q9UI42 421 aa21.09■□□□□ 0.97
PNKP-210ENST00000597965 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
PNKP-210ENST00000597965 GNAI3P08754 354 aa21.08■□□□□ 0.97
PNKP-210ENST00000597965 PHKA1P46020 1223 aa21.08■□□□□ 0.97
PNKP-210ENST00000597965 ZSCAN29Q8IWY8 852 aaPredicted RBP21.08■□□□□ 0.97
PNKP-210ENST00000597965 SCYL3Q8IZE3 742 aa21.08■□□□□ 0.97
PNKP-210ENST00000597965 GAKO14976 1311 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 FCGRTP55899 365 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 MVPQ14764 893 aaKnown RBP21.07■□□□□ 0.96
PNKP-210ENST00000597965 ARHGAP45Q92619 1136 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 FAM163AQ96GL9 167 aaPredicted RBP21.07■□□□□ 0.96
PNKP-210ENST00000597965 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 TRIM47Q96LD4 638 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 MYH2Q9UKX2 1941 aa21.07■□□□□ 0.96
PNKP-210ENST00000597965 RGS3P49796 1198 aa21.06■□□□□ 0.96
PNKP-210ENST00000597965 ABCF2Q9UG63 623 aa21.06■□□□□ 0.96
PNKP-210ENST00000597965 SLC45A1Q9Y2W3 748 aa21.06■□□□□ 0.96
PNKP-210ENST00000597965 DOCK2Q92608 1830 aa21.06■□□□□ 0.96
PNKP-210ENST00000597965 MYPNQ86TC9 1320 aa21.05■□□□□ 0.96
PNKP-210ENST00000597965 MAP4K4O95819 1239 aaPredicted RBP21.05■□□□□ 0.96
PNKP-210ENST00000597965 MYCP01106 439 aaPredicted RBP21.05■□□□□ 0.96
PNKP-210ENST00000597965 OSBPP22059 807 aa21.05■□□□□ 0.96
PNKP-210ENST00000597965 GRK4P32298 578 aa21.05■□□□□ 0.96
PNKP-210ENST00000597965 UBXN2AP68543 259 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms