RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CASP8AP2Q9UKL3 1982 aa21.3■■□□□ 1
IRF3-208ENST00000594387 ARID4AP29374 1257 aaPredicted RBP21.29■■□□□ 1
IRF3-208ENST00000594387 SREBF2Q12772 1141 aa21.29■■□□□ 1
IRF3-208ENST00000594387 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
IRF3-208ENST00000594387 CSRNP1Q96S65 589 aa21.29■■□□□ 1
IRF3-208ENST00000594387 HMG20BQ9P0W2 317 aa21.29■■□□□ 1
IRF3-208ENST00000594387 LRP2BPQ9P2M1 347 aa21.29■■□□□ 1
IRF3-208ENST00000594387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.29■■□□□ 1
IRF3-208ENST00000594387 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
IRF3-208ENST00000594387 IFFO2Q5TF58 517 aa21.28■■□□□ 1
IRF3-208ENST00000594387 DCAF15Q66K64 600 aa21.28■■□□□ 1
IRF3-208ENST00000594387 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
IRF3-208ENST00000594387 SAGE1Q9NXZ1 904 aa21.28■■□□□ 1
IRF3-208ENST00000594387 RAI14Q9P0K7 980 aa21.28■■□□□ 1
IRF3-208ENST00000594387 TSKSQ9UJT2 592 aa21.28■■□□□ 1
IRF3-208ENST00000594387 FZD1Q9UP38 647 aa21.28■■□□□ 1
IRF3-208ENST00000594387 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
IRF3-208ENST00000594387 TRPA1O75762 1119 aa21.27■■□□□ 1
IRF3-208ENST00000594387 MKRN3Q13064 507 aaKnown RBP21.27■■□□□ 1
IRF3-208ENST00000594387 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
IRF3-208ENST00000594387 DBNDD2Q9BQY9 259 aa21.27■■□□□ 1
IRF3-208ENST00000594387 NOL10Q9BSC4 688 aaKnown RBP21.27■■□□□ 1
IRF3-208ENST00000594387 FAM151AQ8WW52 585 aa21.26■□□□□ 0.99
IRF3-208ENST00000594387 TEPSINQ96N21 525 aa21.26■□□□□ 0.99
IRF3-208ENST00000594387 RNF186Q9NXI6 227 aa21.26■□□□□ 0.99
IRF3-208ENST00000594387 CSADQ9Y600 493 aa21.26■□□□□ 0.99
IRF3-208ENST00000594387 OTOFQ9HC10 1997 aa21.26■□□□□ 0.99
IRF3-208ENST00000594387 SSC5DA1L4H1 1573 aa21.25■□□□□ 0.99
IRF3-208ENST00000594387 ZBTB48P10074 688 aaPredicted RBP21.25■□□□□ 0.99
IRF3-208ENST00000594387 MCAMP43121 646 aa21.25■□□□□ 0.99
IRF3-208ENST00000594387 INHBEP58166 350 aa21.25■□□□□ 0.99
IRF3-208ENST00000594387 TCP10Q12799 353 aa21.25■□□□□ 0.99
IRF3-208ENST00000594387 SPRYD7Q5W111 196 aa21.25■□□□□ 0.99
IRF3-208ENST00000594387 CCDC8Q9H0W5 538 aaPredicted RBP21.25■□□□□ 0.99
IRF3-208ENST00000594387 MYO5AQ9Y4I1 1855 aaKnown RBP21.25■□□□□ 0.99
IRF3-208ENST00000594387 MANSC4A6NHS7 340 aaPredicted RBP21.24■□□□□ 0.99
IRF3-208ENST00000594387 MAP3K9P80192 1104 aa21.24■□□□□ 0.99
IRF3-208ENST00000594387 MECOMQ03112 1051 aa21.24■□□□□ 0.99
IRF3-208ENST00000594387 AACSQ86V21 672 aa21.24■□□□□ 0.99
IRF3-208ENST00000594387 CLASRPQ8N2M8 674 aaKnown RBP21.24■□□□□ 0.99
IRF3-208ENST00000594387 FAM163AQ96GL9 167 aaPredicted RBP21.24■□□□□ 0.99
IRF3-208ENST00000594387 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
IRF3-208ENST00000594387 APBB1O00213 710 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 RAB11FIP3O75154 756 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 TM4SF4P48230 202 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 TBC1D9Q6ZT07 1266 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 RHPN1Q8TCX5 695 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 EAF2Q96CJ1 260 aaPredicted RBP21.23■□□□□ 0.99
IRF3-208ENST00000594387 KIF1BPQ96EK5 621 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 WNK4Q96J92 1243 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 ZNF512BQ96KM6 892 aaPredicted RBP21.23■□□□□ 0.99
IRF3-208ENST00000594387 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 MROH7-TTC4A0A0A0MT08 1334 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 GAKO14976 1311 aa21.23■□□□□ 0.99
IRF3-208ENST00000594387 DOCK2Q92608 1830 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 IGSF3O75054 1194 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 MAP4K4O95819 1239 aaPredicted RBP21.22■□□□□ 0.99
IRF3-208ENST00000594387 BTDP43251 543 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 C20orf194Q5TEA3 1177 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 OTUD7BQ6GQQ9 843 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 ZSCAN29Q8IWY8 852 aaPredicted RBP21.22■□□□□ 0.99
IRF3-208ENST00000594387 ZNF341Q9BYN7 854 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 BCL11AQ9H165 835 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 ELP3Q9H9T3 547 aa21.22■□□□□ 0.99
IRF3-208ENST00000594387 MAST2Q6P0Q8 1798 aa21.21■□□□□ 0.99
IRF3-208ENST00000594387 ENTPD3O75355 529 aa21.21■□□□□ 0.99
IRF3-208ENST00000594387 ALDH1A1P00352 501 aa21.21■□□□□ 0.99
IRF3-208ENST00000594387 IFIT2P09913 472 aaKnown RBP21.21■□□□□ 0.99
IRF3-208ENST00000594387 NSUN4Q96CB9 384 aaKnown RBP21.21■□□□□ 0.99
IRF3-208ENST00000594387 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
IRF3-208ENST00000594387 LAMB1P07942 1786 aa21.2■□□□□ 0.99
IRF3-208ENST00000594387 GPR75-ASB3A0A0A6YYF3 556 aa21.2■□□□□ 0.98
IRF3-208ENST00000594387 BAG3O95817 575 aa21.2■□□□□ 0.98
IRF3-208ENST00000594387 NAA16Q6N069 864 aaPredicted RBP21.2■□□□□ 0.98
IRF3-208ENST00000594387 CDAN1Q8IWY9 1227 aa21.2■□□□□ 0.98
IRF3-208ENST00000594387 IDI2Q9BXS1 227 aa21.2■□□□□ 0.98
IRF3-208ENST00000594387 IL1RAPL2Q9NP60 686 aa21.2■□□□□ 0.98
IRF3-208ENST00000594387 RGS3P49796 1198 aa21.19■□□□□ 0.98
IRF3-208ENST00000594387 NFIAQ12857 509 aa21.19■□□□□ 0.98
IRF3-208ENST00000594387 MIGA2Q7L4E1 593 aa21.19■□□□□ 0.98
IRF3-208ENST00000594387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.19■□□□□ 0.98
IRF3-208ENST00000594387 OPTNQ96CV9 577 aa21.19■□□□□ 0.98
IRF3-208ENST00000594387 WRNIP1Q96S55 665 aa21.19■□□□□ 0.98
IRF3-208ENST00000594387 PLCG2P16885 1265 aa21.18■□□□□ 0.98
IRF3-208ENST00000594387 PICALMQ13492 652 aa21.18■□□□□ 0.98
IRF3-208ENST00000594387 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.18■□□□□ 0.98
IRF3-208ENST00000594387 FAM198AQ9UFP1 575 aa21.18■□□□□ 0.98
IRF3-208ENST00000594387 PCNTO95613 3336 aa21.17■□□□□ 0.98
IRF3-208ENST00000594387 CYP2E1P05181 493 aaPredicted RBP21.17■□□□□ 0.98
IRF3-208ENST00000594387 ZAP70P43403 619 aa21.17■□□□□ 0.98
IRF3-208ENST00000594387 VGLL4Q14135 290 aa21.17■□□□□ 0.98
IRF3-208ENST00000594387 TLR7Q9NYK1 1049 aaKnown RBP21.17■□□□□ 0.98
IRF3-208ENST00000594387 GTF2A2P52657 109 aa21.16■□□□□ 0.98
IRF3-208ENST00000594387 ERO1BQ86YB8 467 aa21.16■□□□□ 0.98
IRF3-208ENST00000594387 SIRT2Q8IXJ6 389 aa21.16■□□□□ 0.98
IRF3-208ENST00000594387 WDHD1O75717 1129 aaPredicted RBP21.15■□□□□ 0.98
IRF3-208ENST00000594387 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
IRF3-208ENST00000594387 TBC1D8O95759 1140 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms