RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.12■□□□□ 0.65
CXXC1-217ENST00000592078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.12■□□□□ 0.65
CXXC1-217ENST00000592078 SSH3Q8TE77 659 aa19.12■□□□□ 0.65
CXXC1-217ENST00000592078 TEPSINQ96N21 525 aa19.12■□□□□ 0.65
CXXC1-217ENST00000592078 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
CXXC1-217ENST00000592078 TMOD2Q9NZR1 351 aa19.12■□□□□ 0.65
CXXC1-217ENST00000592078 MAST3O60307 1309 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 SNAP23O00161 211 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 TLR2O60603 784 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 CAPN2P17655 700 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 EN2P19622 333 aaPredicted RBP19.11■□□□□ 0.65
CXXC1-217ENST00000592078 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 CAVIN4Q5BKX8 364 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 FAM83AQ86UY5 434 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 VPS37DQ86XT2 251 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 ERO1BQ86YB8 467 aa19.11■□□□□ 0.65
CXXC1-217ENST00000592078 SPDYE5A6NIY4 337 aa19.1■□□□□ 0.65
CXXC1-217ENST00000592078 CRKP46108 304 aa19.1■□□□□ 0.65
CXXC1-217ENST00000592078 BRI3BPQ8WY22 251 aa19.1■□□□□ 0.65
CXXC1-217ENST00000592078 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
CXXC1-217ENST00000592078 PCDHAC2Q9Y5I4 1007 aa19.1■□□□□ 0.65
CXXC1-217ENST00000592078 PNMA6EA0A0J9YXQ4 647 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 HOXD10P28358 340 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
CXXC1-217ENST00000592078 SNAPC2Q13487 334 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 VGLL4Q14135 290 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 NKX2-3Q8TAU0 364 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 TEKT1Q969V4 418 aa19.09■□□□□ 0.65
CXXC1-217ENST00000592078 RWDD1Q9H446 243 aaPredicted RBP19.09■□□□□ 0.65
CXXC1-217ENST00000592078 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.64
CXXC1-217ENST00000592078 IGHDP01880 384 aa19.08■□□□□ 0.64
CXXC1-217ENST00000592078 KIAA0100Q14667 2235 aaKnown RBP19.08■□□□□ 0.64
CXXC1-217ENST00000592078 TCP10L2B9ZVM9 353 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 HMMRO75330 724 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 LACTBP83111 547 aaPredicted RBP19.07■□□□□ 0.64
CXXC1-217ENST00000592078 FBXO33Q7Z6M2 555 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 DCTPP1Q9H773 170 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
CXXC1-217ENST00000592078 PTCH2Q9Y6C5 1203 aa19.07■□□□□ 0.64
CXXC1-217ENST00000592078 A0A1B0GUL6 1792 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 SRGAP3O43295 1099 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 GYG1P46976 350 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 PPATQ06203 517 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 PPIL2Q13356 520 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 ZNF594Q96JF6 807 aaPredicted RBP19.06■□□□□ 0.64
CXXC1-217ENST00000592078 ZDHHC15Q96MV8 337 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 TMEM39BQ9GZU3 492 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
CXXC1-217ENST00000592078 RPAP1Q9BWH6 1393 aaPredicted RBP19.06■□□□□ 0.64
CXXC1-217ENST00000592078 FXR1P51114 621 aaKnown RBP eCLIP19.05■□□□□ 0.64
CXXC1-217ENST00000592078 HHIPL2Q6UWX4 724 aa19.05■□□□□ 0.64
CXXC1-217ENST00000592078 FAM43AQ8N2R8 423 aa19.05■□□□□ 0.64
CXXC1-217ENST00000592078 JAG2Q9Y219 1238 aa19.05■□□□□ 0.64
CXXC1-217ENST00000592078 SMC5Q8IY18 1101 aa19.04■□□□□ 0.64
CXXC1-217ENST00000592078 CCDC136Q96JN2 1154 aa19.04■□□□□ 0.64
CXXC1-217ENST00000592078 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
CXXC1-217ENST00000592078 ARAP2Q8WZ64 1704 aa19.03■□□□□ 0.64
CXXC1-217ENST00000592078 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
CXXC1-217ENST00000592078 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
CXXC1-217ENST00000592078 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
CXXC1-217ENST00000592078 AOX1Q06278 1338 aa19.02■□□□□ 0.64
CXXC1-217ENST00000592078 PDE8BO95263 885 aa19.02■□□□□ 0.64
CXXC1-217ENST00000592078 ANKRD23Q86SG2 305 aa19.02■□□□□ 0.64
CXXC1-217ENST00000592078 SNCAIPQ9Y6H5 919 aa19.02■□□□□ 0.64
CXXC1-217ENST00000592078 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
CXXC1-217ENST00000592078 IRF6O14896 467 aa19.01■□□□□ 0.63
CXXC1-217ENST00000592078 IFIT1P09914 478 aaKnown RBP19.01■□□□□ 0.63
CXXC1-217ENST00000592078 METTL24Q5JXM2 366 aa19.01■□□□□ 0.63
CXXC1-217ENST00000592078 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
CXXC1-217ENST00000592078 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-217ENST00000592078 HTATIP2Q9BUP3 242 aa19.01■□□□□ 0.63
CXXC1-217ENST00000592078 C17orf99Q6UX52 265 aa19■□□□□ 0.63
CXXC1-217ENST00000592078 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
CXXC1-217ENST00000592078 FAM151AQ8WW52 585 aa19■□□□□ 0.63
CXXC1-217ENST00000592078 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
CXXC1-217ENST00000592078 SRRDQ9UH36 339 aa19■□□□□ 0.63
CXXC1-217ENST00000592078 COLQQ9Y215 455 aaPredicted RBP19■□□□□ 0.63
CXXC1-217ENST00000592078 RAB11FIP3O75154 756 aa18.99■□□□□ 0.63
CXXC1-217ENST00000592078 CIAO1O76071 339 aa18.99■□□□□ 0.63
CXXC1-217ENST00000592078 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
CXXC1-217ENST00000592078 TRIM47Q96LD4 638 aa18.99■□□□□ 0.63
CXXC1-217ENST00000592078 UBXN2AP68543 259 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 CAP1Q01518 475 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 CHAF1AQ13111 956 aaPredicted RBP18.98■□□□□ 0.63
CXXC1-217ENST00000592078 APOBEC3HQ6NTF7 200 aaKnown RBP18.98■□□□□ 0.63
CXXC1-217ENST00000592078 RAET1EQ8TD07 263 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 PUS3Q9BZE2 481 aaKnown RBP18.98■□□□□ 0.63
CXXC1-217ENST00000592078 ZNF112Q9UJU3 913 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 PA2G4Q9UQ80 394 aaKnown RBP18.98■□□□□ 0.63
CXXC1-217ENST00000592078 HTTP42858 3142 aa18.98■□□□□ 0.63
CXXC1-217ENST00000592078 SURF6O75683 361 aaKnown RBP18.97■□□□□ 0.63
CXXC1-217ENST00000592078 GJB1P08034 283 aa18.97■□□□□ 0.63
CXXC1-217ENST00000592078 GRK4P32298 578 aa18.97■□□□□ 0.63
CXXC1-217ENST00000592078 PSMC4P43686 418 aa18.97■□□□□ 0.63
CXXC1-217ENST00000592078 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
CXXC1-217ENST00000592078 ATG9AQ7Z3C6 839 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms