RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 FAM151AQ8WW52 585 aa13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 LAMB1P07942 1786 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 CAP1Q01518 475 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 ANKRD23Q86SG2 305 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 VGLL2Q8N8G2 317 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 LPIN2Q92539 896 aa13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 GNL3LQ9NVN8 582 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-226ENST00000585026 MYCP01106 439 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 C17orf99Q6UX52 265 aa13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 MIGA2Q7L4E1 593 aa13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 RAET1EQ8TD07 263 aa13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
CSNK1D-226ENST00000585026 EYA2O00167 538 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 PDHXO00330 501 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 FGFR2P21802 821 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 PSMC4P43686 418 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 TRIM47Q96LD4 638 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 CPA4Q9UI42 421 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 KCNH4Q9UQ05 1017 aa13.38□□□□□ -0.27
CSNK1D-226ENST00000585026 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 CXCL11O14625 94 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 INPP5BP32019 993 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 UBXN2AP68543 259 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 PARK7Q99497 189 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 BIN2Q9UBW5 565 aaPredicted RBP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-226ENST00000585026 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 GRK4P32298 578 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 FCGRTP55899 365 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 TCP10Q12799 353 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 FASTKD5Q7L8L6 764 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 KLHDC4Q8TBB5 520 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 DPF3Q92784 378 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 USP44Q9H0E7 712 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 OTOFQ9HC10 1997 aa13.36□□□□□ -0.27
CSNK1D-226ENST00000585026 E9PSI1 815 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 H0YGN5 161 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 SEMA3EO15041 775 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 CAPN2P17655 700 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 OSBPP22059 807 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 CDC42EP5Q6NZY7 148 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 PICK1Q9NRD5 415 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 USP40Q9NVE5 1235 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 DAGLAQ9Y4D2 1042 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 ARAP2Q8WZ64 1704 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 MYPNQ86TC9 1320 aa13.35□□□□□ -0.27
CSNK1D-226ENST00000585026 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 GJB1P08034 283 aa13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 ATP2B3Q16720 1220 aa13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 SALL1Q9NSC2 1324 aa13.34□□□□□ -0.27
CSNK1D-226ENST00000585026 ENTPD3O75355 529 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 CIAO1O76071 339 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 GJA8P48165 433 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 RNF208Q9H0X6 261 aa13.33□□□□□ -0.28
CSNK1D-226ENST00000585026 CCL5P13501 91 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 PRDX5P30044 214 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 IL15P40933 162 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 NFIAQ12857 509 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 MTFR1Q15390 333 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 ALDH1L2Q3SY69 923 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 IDI2Q9BXS1 227 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 ZHX2Q9Y6X8 837 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 ADGRA2Q96PE1 1338 aa13.32□□□□□ -0.28
CSNK1D-226ENST00000585026 HTTP42858 3142 aa13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 ZBTB22O15209 634 aa13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 BCRP11274 1271 aa13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 SPTY2D1Q68D10 685 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
CSNK1D-226ENST00000585026 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms