RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 SLC4A8Q2Y0W8 1093 aa9.39□□□□□ -0.91
NF1-222ENST00000582892 KMT5BQ4FZB7 885 aa9.39□□□□□ -0.91
NF1-222ENST00000582892 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
NF1-222ENST00000582892 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
NF1-222ENST00000582892 TRMT112Q9UI30 125 aaKnown RBP9.39□□□□□ -0.91
NF1-222ENST00000582892 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
NF1-222ENST00000582892 LDLRAD1Q5T700 205 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 ERO1AQ96HE7 468 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 PTPN18Q99952 460 aa9.38□□□□□ -0.91
NF1-222ENST00000582892 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
NF1-222ENST00000582892 E9PSI1 815 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 UFL1O94874 794 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 AIMP1Q12904 312 aaKnown RBP9.37□□□□□ -0.91
NF1-222ENST00000582892 TCIRG1Q13488 830 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 Q7L0L9 218 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 AGBL3Q8NEM8 1001 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 WNK4Q96J92 1243 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 ARHGAP39Q9C0H5 1083 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
NF1-222ENST00000582892 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 WNT10BO00744 389 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 EIF2S2P20042 333 aaKnown RBP9.36□□□□□ -0.91
NF1-222ENST00000582892 SP3Q02447 781 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 MTFR1Q15390 333 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 DPF3Q92784 378 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 FAM89AQ96GI7 184 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 EYA3Q99504 573 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
NF1-222ENST00000582892 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 SEC31BQ9NQW1 1179 aa9.36□□□□□ -0.91
NF1-222ENST00000582892 MANSC4A6NHS7 340 aaPredicted RBP9.35□□□□□ -0.91
NF1-222ENST00000582892 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
NF1-222ENST00000582892 AAMPQ13685 434 aa9.35□□□□□ -0.91
NF1-222ENST00000582892 ARMC9Q7Z3E5 817 aa9.35□□□□□ -0.91
NF1-222ENST00000582892 XAGE3Q8WTP9 111 aa9.35□□□□□ -0.91
NF1-222ENST00000582892 PCDHAC2Q9Y5I4 1007 aa9.35□□□□□ -0.91
NF1-222ENST00000582892 AOX1Q06278 1338 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 U2AF1L5P0DN76 240 aaPredicted RBP9.34□□□□□ -0.91
NF1-222ENST00000582892 MDM2Q00987 491 aaPredicted RBP9.34□□□□□ -0.91
NF1-222ENST00000582892 U2AF1Q01081 240 aaKnown RBP eCLIP9.34□□□□□ -0.91
NF1-222ENST00000582892 AMHR2Q16671 573 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 COPS6Q7L5N1 327 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 SLC10A4Q96EP9 437 aa9.34□□□□□ -0.91
NF1-222ENST00000582892 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 ATP5J2-PTCD1G3V325 749 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 ZBTB7BO15156 539 aaPredicted RBP9.33□□□□□ -0.92
NF1-222ENST00000582892 NF2P35240 595 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
NF1-222ENST00000582892 CCDC27Q2M243 656 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 CENPQQ7L2Z9 268 aaPredicted RBP9.33□□□□□ -0.92
NF1-222ENST00000582892 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 UBE2Q1Q7Z7E8 422 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
NF1-222ENST00000582892 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 PODXL2Q9NZ53 605 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
NF1-222ENST00000582892 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
NF1-222ENST00000582892 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
NF1-222ENST00000582892 ZBTB48P10074 688 aaPredicted RBP9.32□□□□□ -0.92
NF1-222ENST00000582892 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
NF1-222ENST00000582892 DACT2Q5SW24 774 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 DEFB123Q8N688 67 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 CFAP53Q96M91 514 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 IPO9Q96P70 1041 aaKnown RBP9.32□□□□□ -0.92
NF1-222ENST00000582892 CRBNQ96SW2 442 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 SLC24A3Q9HC58 644 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 STAP2Q9UGK3 403 aa9.32□□□□□ -0.92
NF1-222ENST00000582892 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
NF1-222ENST00000582892 TRIM66O15016 1216 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 CFHP08603 1231 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 CTGFP29279 349 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 INHBEP58166 350 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 PDE3AQ14432 1141 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 NBPF11Q86T75 865 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 TXNRD3Q86VQ6 643 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 BRI3BPQ8WY22 251 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
NF1-222ENST00000582892 RUNDC1Q96C34 613 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 ZBED3Q96IU2 234 aaPredicted RBP9.31□□□□□ -0.92
NF1-222ENST00000582892 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
NF1-222ENST00000582892 APAF1O14727 1248 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 MAP3K11Q16584 847 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 NBPF12Q5TAG4 269 aaPredicted RBP9.3□□□□□ -0.92
NF1-222ENST00000582892 KIAA0825Q8IV33 1275 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 FAM43AQ8N2R8 423 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 DEFB129Q9H1M3 183 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms