RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 E9PSI1 815 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 IRF6O14896 467 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
GGA3-210ENST00000580799 PPATQ06203 517 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
GGA3-210ENST00000580799 HABP4Q5JVS0 413 aaKnown RBP12.85□□□□□ -0.35
GGA3-210ENST00000580799 CENPFP49454 3210 aa12.85□□□□□ -0.35
GGA3-210ENST00000580799 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
GGA3-210ENST00000580799 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
GGA3-210ENST00000580799 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
GGA3-210ENST00000580799 ZNF112Q9UJU3 913 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
GGA3-210ENST00000580799 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
GGA3-210ENST00000580799 SEMA3EO15041 775 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 CIAO1O76071 339 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 KCNH4Q9UQ05 1017 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
GGA3-210ENST00000580799 ZBTB22O15209 634 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
GGA3-210ENST00000580799 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
GGA3-210ENST00000580799 PRDX5P30044 214 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 INPP5BP32019 993 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 NOL9Q5SY16 702 aaKnown RBP12.82□□□□□ -0.36
GGA3-210ENST00000580799 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
GGA3-210ENST00000580799 PDHXO00330 501 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 HOXD10P28358 340 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 TCP10Q12799 353 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 SRRDQ9UH36 339 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 AK9Q5TCS8 1911 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
GGA3-210ENST00000580799 ADGRA2Q96PE1 1338 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 BRCA2P51587 3418 aa12.81□□□□□ -0.36
GGA3-210ENST00000580799 CXCL11O14625 94 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
GGA3-210ENST00000580799 PSMC4P43686 418 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 NFIAQ12857 509 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 ZGPATQ8N5A5 531 aaKnown RBP12.8□□□□□ -0.36
GGA3-210ENST00000580799 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 SIL1Q9H173 461 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
GGA3-210ENST00000580799 ENTPD3O75355 529 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
GGA3-210ENST00000580799 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
GGA3-210ENST00000580799 MOGSQ13724 837 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 SLF2Q8IX21 1173 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 PARK7Q99497 189 aaKnown RBP12.79□□□□□ -0.36
GGA3-210ENST00000580799 IDI2Q9BXS1 227 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
GGA3-210ENST00000580799 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
GGA3-210ENST00000580799 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
GGA3-210ENST00000580799 OSBPP22059 807 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 GRK4P32298 578 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 PHKA1P46020 1223 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
GGA3-210ENST00000580799 RAET1EQ8TD07 263 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 COPRSQ9NQ92 184 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 GAKO14976 1311 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 MGAMO43451 1857 aa12.78□□□□□ -0.36
GGA3-210ENST00000580799 DOCK1Q14185 1865 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 BCRP11274 1271 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 CTGFP29279 349 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 RGS3P49796 1198 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 FXR1P51114 621 aaKnown RBP eCLIP12.77□□□□□ -0.37
GGA3-210ENST00000580799 FCGRTP55899 365 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 SPTY2D1Q68D10 685 aaPredicted RBP12.77□□□□□ -0.37
GGA3-210ENST00000580799 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
GGA3-210ENST00000580799 SCYL3Q8IZE3 742 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
GGA3-210ENST00000580799 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.37
GGA3-210ENST00000580799 MYPNQ86TC9 1320 aa12.77□□□□□ -0.37
GGA3-210ENST00000580799 RFX7Q2KHR2 1363 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms