RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 PI16Q6UXB8 463 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 EAF2Q96CJ1 260 aaPredicted RBP14.22□□□□□ -0.13
GGA3-204ENST00000578208 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
GGA3-204ENST00000578208 NOL10Q9BSC4 688 aaKnown RBP14.22□□□□□ -0.13
GGA3-204ENST00000578208 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 IL1RAPL2Q9NP60 686 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 USP40Q9NVE5 1235 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 TLR7Q9NYK1 1049 aaKnown RBP14.22□□□□□ -0.13
GGA3-204ENST00000578208 RPAP1Q9BWH6 1393 aaPredicted RBP14.22□□□□□ -0.13
GGA3-204ENST00000578208 MROH7-TTC4A0A0A0MT08 1334 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 GAKO14976 1311 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
GGA3-204ENST00000578208 CA12O43570 354 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 IFIT2P09913 472 aaKnown RBP14.21□□□□□ -0.13
GGA3-204ENST00000578208 KIF23Q02241 960 aaPredicted RBP14.21□□□□□ -0.13
GGA3-204ENST00000578208 MECOMQ03112 1051 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 MAP3K11Q16584 847 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 CDC42EP5Q6NZY7 148 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 SIRT2Q8IXJ6 389 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
GGA3-204ENST00000578208 SNRKQ9NRH2 765 aa14.21□□□□□ -0.13
GGA3-204ENST00000578208 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
GGA3-204ENST00000578208 MAST2Q6P0Q8 1798 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 UNCXA6NJT0 531 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 BTDP43251 543 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 DCAF15Q66K64 600 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 FZD1Q9UP38 647 aa14.2□□□□□ -0.14
GGA3-204ENST00000578208 IGSF3O75054 1194 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 ZAP70P43403 619 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 TCP10Q12799 353 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 LDLRAD1Q5T700 205 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 NAA16Q6N069 864 aaPredicted RBP14.19□□□□□ -0.14
GGA3-204ENST00000578208 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 NSUN4Q96CB9 384 aaKnown RBP14.19□□□□□ -0.14
GGA3-204ENST00000578208 FAM163AQ96GL9 167 aaPredicted RBP14.19□□□□□ -0.14
GGA3-204ENST00000578208 TEPSINQ96N21 525 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 LRRCC1Q9C099 1032 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 MYH2Q9UKX2 1941 aa14.19□□□□□ -0.14
GGA3-204ENST00000578208 USP2O75604 605 aaPredicted RBP14.18□□□□□ -0.14
GGA3-204ENST00000578208 MAP4K4O95819 1239 aaPredicted RBP14.18□□□□□ -0.14
GGA3-204ENST00000578208 SREBF2Q12772 1141 aa14.18□□□□□ -0.14
GGA3-204ENST00000578208 MKRN3Q13064 507 aaKnown RBP14.18□□□□□ -0.14
GGA3-204ENST00000578208 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
GGA3-204ENST00000578208 CSADQ9Y600 493 aa14.18□□□□□ -0.14
GGA3-204ENST00000578208 ENTPD3O75355 529 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 BAG3O95817 575 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 CYP2E1P05181 493 aaPredicted RBP14.17□□□□□ -0.14
GGA3-204ENST00000578208 HSPA8P11142 646 aaKnown RBP14.17□□□□□ -0.14
GGA3-204ENST00000578208 RGS3P49796 1198 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 LBX1P52954 281 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 NFIAQ12857 509 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 ZSCAN29Q8IWY8 852 aaPredicted RBP14.17□□□□□ -0.14
GGA3-204ENST00000578208 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 IDI2Q9BXS1 227 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 PRDM10Q9NQV6 1147 aa14.17□□□□□ -0.14
GGA3-204ENST00000578208 GPR75-ASB3A0A0A6YYF3 556 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 IDH1O75874 414 aaKnown RBP14.16□□□□□ -0.14
GGA3-204ENST00000578208 ZBTB48P10074 688 aaPredicted RBP14.16□□□□□ -0.14
GGA3-204ENST00000578208 PLCG2P16885 1265 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 PICALMQ13492 652 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 TTF1Q15361 905 aaPredicted RBP14.16□□□□□ -0.14
GGA3-204ENST00000578208 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 WNK4Q96J92 1243 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 CLMNQ96JQ2 1002 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 CRBNQ96SW2 442 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 SAGE1Q9NXZ1 904 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 FAM198AQ9UFP1 575 aa14.16□□□□□ -0.14
GGA3-204ENST00000578208 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 MAP3K12Q12852 859 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 TEX11Q8IYF3 940 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.15□□□□□ -0.14
GGA3-204ENST00000578208 WRNIP1Q96S55 665 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 CSRNP1Q96S65 589 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
GGA3-204ENST00000578208 ELP3Q9H9T3 547 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 PIH1D3Q9NQM4 214 aaKnown RBP14.15□□□□□ -0.14
GGA3-204ENST00000578208 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
GGA3-204ENST00000578208 OTOFQ9HC10 1997 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 MANSC4A6NHS7 340 aaPredicted RBP14.14□□□□□ -0.15
GGA3-204ENST00000578208 CYP7A1P22680 504 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 COL13A1Q5TAT6 717 aaPredicted RBP14.14□□□□□ -0.15
GGA3-204ENST00000578208 TMED8Q6PL24 325 aaPredicted RBP14.14□□□□□ -0.15
GGA3-204ENST00000578208 CERS3Q8IU89 383 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 TNS4Q8IZW8 715 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.14□□□□□ -0.15
GGA3-204ENST00000578208 ZNF384Q8TF68 577 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 GPATCH3Q96I76 525 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 DCTPP1Q9H773 170 aa14.14□□□□□ -0.15
GGA3-204ENST00000578208 AATFQ9NY61 560 aaKnown RBP eCLIP14.14□□□□□ -0.15
GGA3-204ENST00000578208 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
GGA3-204ENST00000578208 WDHD1O75717 1129 aaPredicted RBP14.13□□□□□ -0.15
GGA3-204ENST00000578208 TRPA1O75762 1119 aa14.13□□□□□ -0.15
GGA3-204ENST00000578208 INHBEP58166 350 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms