RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ARHGEF6Q15052 776 aa19.9■□□□□ 0.78
VAPA-204ENST00000577901 PUM3Q15397 648 aaKnown RBP19.9■□□□□ 0.78
VAPA-204ENST00000577901 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
VAPA-204ENST00000577901 TMEM57Q8N5G2 664 aa19.9■□□□□ 0.78
VAPA-204ENST00000577901 SNCAIPQ9Y6H5 919 aa19.9■□□□□ 0.78
VAPA-204ENST00000577901 MAST3O60307 1309 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 IFIT1P09914 478 aaKnown RBP19.89■□□□□ 0.77
VAPA-204ENST00000577901 MS4A1P11836 297 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 FGFR2P21802 821 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 APOBEC3HQ6NTF7 200 aaKnown RBP19.89■□□□□ 0.77
VAPA-204ENST00000577901 FAM83AQ86UY5 434 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 HOOK2Q96ED9 719 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 WRNIP1Q96S55 665 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 SUGT1Q9Y2Z0 365 aa19.89■□□□□ 0.77
VAPA-204ENST00000577901 FKBP1CQ5VVH2 108 aa19.88■□□□□ 0.77
VAPA-204ENST00000577901 ZKSCAN4Q969J2 545 aaPredicted RBP19.88■□□□□ 0.77
VAPA-204ENST00000577901 WDHD1O75717 1129 aaPredicted RBP19.87■□□□□ 0.77
VAPA-204ENST00000577901 GNAI2P04899 355 aa19.87■□□□□ 0.77
VAPA-204ENST00000577901 CETPP11597 493 aa19.87■□□□□ 0.77
VAPA-204ENST00000577901 EN2P19622 333 aaPredicted RBP19.87■□□□□ 0.77
VAPA-204ENST00000577901 C1QBPQ07021 282 aaKnown RBP19.87■□□□□ 0.77
VAPA-204ENST00000577901 HHIPL2Q6UWX4 724 aa19.87■□□□□ 0.77
VAPA-204ENST00000577901 ERO1BQ86YB8 467 aa19.87■□□□□ 0.77
VAPA-204ENST00000577901 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
VAPA-204ENST00000577901 RBBP6Q7Z6E9 1792 aaKnown RBP19.87■□□□□ 0.77
VAPA-204ENST00000577901 EYA2O00167 538 aa19.86■□□□□ 0.77
VAPA-204ENST00000577901 ZNF333Q96JL9 665 aa19.86■□□□□ 0.77
VAPA-204ENST00000577901 TMEM106CQ9BVX2 250 aa19.86■□□□□ 0.77
VAPA-204ENST00000577901 ZCCHC17Q9NP64 241 aaKnown RBP19.86■□□□□ 0.77
VAPA-204ENST00000577901 PTCH2Q9Y6C5 1203 aa19.86■□□□□ 0.77
VAPA-204ENST00000577901 IRF6O14896 467 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 SLC5A1P13866 664 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 RFX5P48382 616 aaPredicted RBP19.85■□□□□ 0.77
VAPA-204ENST00000577901 SNAPC2Q13487 334 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 SLC9C1Q4G0N8 1177 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 DCAF15Q66K64 600 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 NBPF11Q86T75 865 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 ITPRIPQ8IWB1 547 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 LPIN2Q92539 896 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 YTHDC1Q96MU7 727 aaKnown RBP19.85■□□□□ 0.77
VAPA-204ENST00000577901 FBXO3Q9UK99 471 aa19.85■□□□□ 0.77
VAPA-204ENST00000577901 RPAP1Q9BWH6 1393 aaPredicted RBP19.84■□□□□ 0.77
VAPA-204ENST00000577901 BTBD19C9JJ37 291 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 TLR2O60603 784 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 PPIL2Q13356 520 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 MIGA2Q7L4E1 593 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 WDR66Q8TBY9 1149 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 ZNF341Q9BYN7 854 aa19.84■□□□□ 0.77
VAPA-204ENST00000577901 SRGAP3O43295 1099 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 CIAO1O76071 339 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 RLBP1P12271 317 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 LACTBP83111 547 aaPredicted RBP19.82■□□□□ 0.76
VAPA-204ENST00000577901 PPATQ06203 517 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 KIF22Q14807 665 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 ATG9AQ7Z3C6 839 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 FAM151AQ8WW52 585 aa19.82■□□□□ 0.76
VAPA-204ENST00000577901 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
VAPA-204ENST00000577901 TCP10Q12799 353 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 MTX1Q13505 466 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 SLC4A8Q2Y0W8 1093 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.81■□□□□ 0.76
VAPA-204ENST00000577901 ARHGAP39Q9C0H5 1083 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 SIL1Q9H173 461 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 COPRSQ9NQ92 184 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 DAGLAQ9Y4D2 1042 aa19.81■□□□□ 0.76
VAPA-204ENST00000577901 INPP5BP32019 993 aa19.8■□□□□ 0.76
VAPA-204ENST00000577901 DIXDC1Q155Q3 683 aa19.8■□□□□ 0.76
VAPA-204ENST00000577901 CDC42EP5Q6NZY7 148 aa19.8■□□□□ 0.76
VAPA-204ENST00000577901 PANK1Q8TE04 598 aa19.8■□□□□ 0.76
VAPA-204ENST00000577901 MYCP01106 439 aaPredicted RBP19.79■□□□□ 0.76
VAPA-204ENST00000577901 GNRH1P01148 92 aa19.79■□□□□ 0.76
VAPA-204ENST00000577901 PRDX5P30044 214 aa19.79■□□□□ 0.76
VAPA-204ENST00000577901 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
VAPA-204ENST00000577901 HABP4Q5JVS0 413 aaKnown RBP19.79■□□□□ 0.76
VAPA-204ENST00000577901 SH3TC2Q8TF17 1288 aa19.79■□□□□ 0.76
VAPA-204ENST00000577901 CEP126Q9P2H0 1117 aa19.79■□□□□ 0.76
VAPA-204ENST00000577901 ZNF112Q9UJU3 913 aa19.79■□□□□ 0.76
VAPA-204ENST00000577901 LDHBP07195 334 aaKnown RBP19.78■□□□□ 0.76
VAPA-204ENST00000577901 NFIAQ12857 509 aa19.78■□□□□ 0.76
VAPA-204ENST00000577901 ATP2B3Q16720 1220 aa19.78■□□□□ 0.76
VAPA-204ENST00000577901 USP40Q9NVE5 1235 aa19.78■□□□□ 0.76
VAPA-204ENST00000577901 GNL3LQ9NVN8 582 aaKnown RBP19.78■□□□□ 0.76
VAPA-204ENST00000577901 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
VAPA-204ENST00000577901 ZSWIM8A7E2V4 1837 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 PDHXO00330 501 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 PRMT2P55345 433 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 C17orf99Q6UX52 265 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 ANKRD23Q86SG2 305 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 FAM198AQ9UFP1 575 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 CPA4Q9UI42 421 aa19.77■□□□□ 0.76
VAPA-204ENST00000577901 MYH13Q9UKX3 1938 aa19.76■□□□□ 0.75
VAPA-204ENST00000577901 ECM2O94769 699 aaPredicted RBP19.76■□□□□ 0.75
VAPA-204ENST00000577901 CHMP4BQ9H444 224 aaKnown RBP19.76■□□□□ 0.75
VAPA-204ENST00000577901 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
VAPA-204ENST00000577901 KCNH4Q9UQ05 1017 aa19.76■□□□□ 0.75
VAPA-204ENST00000577901 SALL1Q9NSC2 1324 aa19.76■□□□□ 0.75
VAPA-204ENST00000577901 SEMA3EO15041 775 aa19.75■□□□□ 0.75
VAPA-204ENST00000577901 ATP8B2P98198 1209 aa19.75■□□□□ 0.75
VAPA-204ENST00000577901 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms