RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 PDE8AO60658 829 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 HOXB7P09629 217 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 ATP2B4P23634 1241 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 ZNF280AP59817 542 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 FKBP1BP68106 108 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 E2F4Q16254 413 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 PKN2Q16513 984 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 MOB2Q70IA6 237 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 ANKRD18AQ8IVF6 992 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 SMPD1P17405 629 aa8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 NF2P35240 595 aa8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 PODNQ7Z5L7 613 aa8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 ZNF296Q8WUU4 475 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 CWC25Q9NXE8 425 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-212ENST00000577721 XDHP47989 1333 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 DDX58O95786 925 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 PCCAP05165 728 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 PRKG1Q13976 671 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 NBPF9Q3BBW0 867 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 CCDC191Q8NCU4 936 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 CDC5LQ99459 802 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 MBIPQ9NS73 344 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 CASP8AP2Q9UKL3 1982 aa8.84□□□□□ -0.99
SMARCE1-212ENST00000577721 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 DUOX1Q9NRD9 1551 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 GPR25O00155 361 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 SREBF2Q12772 1141 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 ARMC9Q7Z3E5 817 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 GMLQ99445 158 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 MXD3Q9BW11 206 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 ADAMTS8Q9UP79 889 aa8.83□□□□□ -1
SMARCE1-212ENST00000577721 RCCD1A6NED2 376 aa8.82□□□□□ -1
SMARCE1-212ENST00000577721 WTIPA6NIX2 430 aaPredicted RBP8.82□□□□□ -1
SMARCE1-212ENST00000577721 WNT7AO00755 349 aa8.82□□□□□ -1
SMARCE1-212ENST00000577721 FKTNO75072 461 aa8.82□□□□□ -1
SMARCE1-212ENST00000577721 TM4SF4P48230 202 aa8.82□□□□□ -1
SMARCE1-212ENST00000577721 PTPN12Q05209 780 aaKnown RBP8.82□□□□□ -1
SMARCE1-212ENST00000577721 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
SMARCE1-212ENST00000577721 METTL22Q9BUU2 404 aaPredicted RBP8.82□□□□□ -1
SMARCE1-212ENST00000577721 MYBBP1AQ9BQG0 1328 aaKnown RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 WNT10BO00744 389 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 SASH1O94885 1247 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 CCT4P50991 539 aaKnown RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 CTSWP56202 376 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 GNAI1P63096 354 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 CALD1Q05682 793 aaKnown RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 DDX10Q13206 875 aaKnown RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 CCDC30Q5VVM6 783 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 TTLL5Q6EMB2 1281 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 FBXO46Q6PJ61 603 aaPredicted RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 COA1Q9GZY4 146 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
SMARCE1-212ENST00000577721 MINPP1Q9UNW1 487 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 MAP3K2Q9Y2U5 619 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
SMARCE1-212ENST00000577721 IGHMBP2P38935 993 aaKnown RBP8.8□□□□□ -1
SMARCE1-212ENST00000577721 KCNJ4P48050 445 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 DACT2Q5SW24 774 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 APOBEC3FQ8IUX4 373 aaKnown RBP8.8□□□□□ -1
SMARCE1-212ENST00000577721 KIAA0825Q8IV33 1275 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 C8orf58Q8NAV2 365 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 TTLL11Q8NHH1 800 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 GREM2Q9H772 168 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 IFT57Q9NWB7 429 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 LEMD3Q9Y2U8 911 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 ANKRD36CQ5JPF3 1778 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 MYO3BQ8WXR4 1341 aa8.8□□□□□ -1
SMARCE1-212ENST00000577721 PI4KAP2A4QPH2 592 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 APAF1O14727 1248 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 ALDH1A1P00352 501 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 ZNF853P0CG23 659 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 GTF2IP78347 998 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
SMARCE1-212ENST00000577721 KSR2Q6VAB6 950 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 PI4KAP1Q8N8J0 262 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 GCC1Q96CN9 775 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 R3HDMLQ9H3Y0 253 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 TRIM17Q9Y577 477 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 TAF1P21675 1872 aa8.79□□□□□ -1
SMARCE1-212ENST00000577721 LAMB2P55268 1798 aa8.78□□□□□ -1
SMARCE1-212ENST00000577721 MED23Q9ULK4 1368 aa8.78□□□□□ -1
SMARCE1-212ENST00000577721 MANSC4A6NHS7 340 aaPredicted RBP8.78□□□□□ -1
SMARCE1-212ENST00000577721 J3QL48 77 aa8.78□□□□□ -1
SMARCE1-212ENST00000577721 PPP1R12BO60237 982 aaPredicted RBP8.78□□□□□ -1
SMARCE1-212ENST00000577721 MMP14P50281 582 aa8.78□□□□□ -1
SMARCE1-212ENST00000577721 INHBEP58166 350 aa8.78□□□□□ -1
SMARCE1-212ENST00000577721 DLGAP5Q15398 846 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms