RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GPR25O00155 361 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ZBTB7BO15156 539 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 CACNB3P54284 484 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 MAP3K9P80192 1104 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 DIXDC1Q155Q3 683 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 CDC42EP5Q6NZY7 148 aa21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 FTSJ3Q8IY81 847 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.12■□□□□ 0.97
MAP1LC3B-208ENST00000570189 RFX7Q2KHR2 1363 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 TBC1D8O95759 1140 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 RLBP1P12271 317 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ARID4AP29374 1257 aaPredicted RBP21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 RGS19P49795 217 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 VGLL4Q14135 290 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 PKN2Q16513 984 aaKnown RBP21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 SPTY2D1Q68D10 685 aaPredicted RBP21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ZNF296Q8WUU4 475 aaPredicted RBP21.11■□□□□ 0.97
MAP1LC3B-208ENST00000570189 IGF2BP3O00425 579 aaKnown RBP eCLIP21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 SLF2Q8IX21 1173 aa21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 OPTNQ96CV9 577 aa21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 MS4A4AQ96JQ5 239 aa21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 IDI2Q9BXS1 227 aa21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 NOP58Q9Y2X3 529 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 CSADQ9Y600 493 aa21.1■□□□□ 0.97
MAP1LC3B-208ENST00000570189 SPDYE5A6NIY4 337 aa21.09■□□□□ 0.97
MAP1LC3B-208ENST00000570189 OTUD7BQ6GQQ9 843 aa21.09■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ELP3Q9H9T3 547 aa21.09■□□□□ 0.97
MAP1LC3B-208ENST00000570189 MAST2Q6P0Q8 1798 aa21.09■□□□□ 0.97
MAP1LC3B-208ENST00000570189 IGSF3O75054 1194 aa21.08■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
MAP1LC3B-208ENST00000570189 FAM198AQ9UFP1 575 aa21.08■□□□□ 0.97
MAP1LC3B-208ENST00000570189 ZNF112Q9UJU3 913 aa21.08■□□□□ 0.97
MAP1LC3B-208ENST00000570189 SNCAIPQ9Y6H5 919 aa21.08■□□□□ 0.97
MAP1LC3B-208ENST00000570189 FKTNO75072 461 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ENTPD3O75355 529 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MAP4K4O95819 1239 aaPredicted RBP21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 GTF2A2P52657 109 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 NFIAQ12857 509 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ERO1BQ86YB8 467 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ZNF341Q9BYN7 854 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 R3HDMLQ9H3Y0 253 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 HMG20BQ9P0W2 317 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
MAP1LC3B-208ENST00000570189 CCDC85CA6NKD9 419 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 NPM3O75607 178 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 UQCRFS1P1P0C7P4 283 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MS4A1P11836 297 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 DZIP1Q86YF9 867 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 SPATA5Q8NB90 893 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 WRNIP1Q96S55 665 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 PTPN18Q99952 460 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ZCCHC17Q9NP64 241 aaKnown RBP21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 USP40Q9NVE5 1235 aa21.06■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MROH7-TTC4A0A0A0MT08 1334 aa21.05■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ABCF2Q9UG63 623 aa21.05■□□□□ 0.96
MAP1LC3B-208ENST00000570189 COL2A1P02458 1487 aaPredicted RBP21.05■□□□□ 0.96
MAP1LC3B-208ENST00000570189 GPR75-ASB3A0A0A6YYF3 556 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MAP3K10Q02779 954 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 PPIL2Q13356 520 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 TNNI3KQ59H18 835 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 NOL9Q5SY16 702 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 GORABQ5T7V8 394 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ZNF384Q8TF68 577 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 BRI3BPQ8WY22 251 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 FPGT-TNNI3KV9GXZ4 949 aa21.04■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MCAMP43121 646 aa21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MECOMQ03112 1051 aa21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 PPATQ06203 517 aa21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 NSUN4Q96CB9 384 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 FOCADQ5VW36 1801 aa21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 MYO5AQ9Y4I1 1855 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3B-208ENST00000570189 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 LDHCP07864 332 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 RGS3P49796 1198 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 GSTO1P78417 241 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 TCP10Q12799 353 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 CRHR2Q13324 411 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 CEP85Q6P2H3 762 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 ZKSCAN4Q969J2 545 aaPredicted RBP21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 OTUD5Q96G74 571 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 C1orf115Q9H7X2 142 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 CDK5RAP2Q96SN8 1893 aa21.02■□□□□ 0.96
MAP1LC3B-208ENST00000570189 HTTP42858 3142 aa21.02■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DOCK1Q14185 1865 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 CCL15-CCL14A0A0B4J2E2 113 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 CETPP11597 493 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 BTDP43251 543 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 RHBDL3P58872 404 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 CCL15Q16663 113 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 FBXO46Q6PJ61 603 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 PI16Q6UXB8 463 aa21.01■□□□□ 0.95
MAP1LC3B-208ENST00000570189 PTPRFP10586 1907 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms