RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 GLRX3O76003 335 aaKnown RBP20.34■□□□□ 0.85
CLN6-208ENST00000567060 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
CLN6-208ENST00000567060 LNPKQ9C0E8 428 aa20.34■□□□□ 0.85
CLN6-208ENST00000567060 MOB2Q70IA6 237 aa20.33■□□□□ 0.85
CLN6-208ENST00000567060 REM2Q8IYK8 340 aaPredicted RBP20.33■□□□□ 0.85
CLN6-208ENST00000567060 CERS5Q8N5B7 392 aa20.33■□□□□ 0.85
CLN6-208ENST00000567060 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
CLN6-208ENST00000567060 LDHBP07195 334 aaKnown RBP20.32■□□□□ 0.84
CLN6-208ENST00000567060 SLF2Q8IX21 1173 aa20.32■□□□□ 0.84
CLN6-208ENST00000567060 HAUS7Q99871 368 aa20.32■□□□□ 0.84
CLN6-208ENST00000567060 SERPINA10Q9UK55 444 aa20.32■□□□□ 0.84
CLN6-208ENST00000567060 SCAF8Q9UPN6 1271 aaKnown RBP20.32■□□□□ 0.84
CLN6-208ENST00000567060 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
CLN6-208ENST00000567060 FKBP1BP68106 108 aa20.31■□□□□ 0.84
CLN6-208ENST00000567060 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
CLN6-208ENST00000567060 TICAM2Q86XR7 235 aa20.31■□□□□ 0.84
CLN6-208ENST00000567060 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
CLN6-208ENST00000567060 PDE1AP54750 535 aa20.3■□□□□ 0.84
CLN6-208ENST00000567060 KIAA0825Q8IV33 1275 aa20.3■□□□□ 0.84
CLN6-208ENST00000567060 MYOZ2Q9NPC6 264 aa20.3■□□□□ 0.84
CLN6-208ENST00000567060 TTF2Q9UNY4 1162 aaKnown RBP20.3■□□□□ 0.84
CLN6-208ENST00000567060 MKI67P46013 3256 aaKnown RBP20.29■□□□□ 0.84
CLN6-208ENST00000567060 UBE2Q2LH0YL09 131 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 TBC1D8O95759 1140 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 CYP2E1P05181 493 aaPredicted RBP20.29■□□□□ 0.84
CLN6-208ENST00000567060 ZAP70P43403 619 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 GSTO1P78417 241 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 PRPF38BQ5VTL8 546 aaKnown RBP20.29■□□□□ 0.84
CLN6-208ENST00000567060 PRAMEF18Q5VWM3 479 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 ABCF2Q9UG63 623 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 JAG2Q9Y219 1238 aa20.29■□□□□ 0.84
CLN6-208ENST00000567060 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
CLN6-208ENST00000567060 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
CLN6-208ENST00000567060 TEKT1Q969V4 418 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 FAM163AQ96GL9 167 aaPredicted RBP20.28■□□□□ 0.84
CLN6-208ENST00000567060 MXD3Q9BW11 206 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 BCL11AQ9H165 835 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 BOLA2Q9H3K6 86 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 PAG1Q9NWQ8 432 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 LRP2BPQ9P2M1 347 aa20.28■□□□□ 0.84
CLN6-208ENST00000567060 PITPNM2Q9BZ72 1349 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 LDHCP07864 332 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 PRDX5P30044 214 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 MAP3K12Q12852 859 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 PI16Q6UXB8 463 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 DZIP1Q86YF9 867 aaKnown RBP20.27■□□□□ 0.84
CLN6-208ENST00000567060 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
CLN6-208ENST00000567060 MAST2Q6P0Q8 1798 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
CLN6-208ENST00000567060 TM4SF4P48230 202 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 PKN2Q16513 984 aaKnown RBP20.26■□□□□ 0.83
CLN6-208ENST00000567060 NBPF9Q3BBW0 867 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 OTUD7AQ8TE49 926 aaPredicted RBP20.26■□□□□ 0.83
CLN6-208ENST00000567060 DNAJC2Q99543 621 aaKnown RBP20.26■□□□□ 0.83
CLN6-208ENST00000567060 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.83
CLN6-208ENST00000567060 SNRKQ9NRH2 765 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 PAPPA2Q9BXP8 1791 aa20.26■□□□□ 0.83
CLN6-208ENST00000567060 MYO1BO43795 1136 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 DLGAP5Q15398 846 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 ZSCAN25Q6NSZ9 544 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 ZBED3Q96IU2 234 aaPredicted RBP20.25■□□□□ 0.83
CLN6-208ENST00000567060 ZDHHC15Q96MV8 337 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 RAI14Q9P0K7 980 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 HTTP42858 3142 aa20.25■□□□□ 0.83
CLN6-208ENST00000567060 CENPFP49454 3210 aa20.24■□□□□ 0.83
CLN6-208ENST00000567060 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
CLN6-208ENST00000567060 GOLIM4O00461 696 aa20.24■□□□□ 0.83
CLN6-208ENST00000567060 CRKP46108 304 aa20.24■□□□□ 0.83
CLN6-208ENST00000567060 NSUN4Q96CB9 384 aaKnown RBP20.24■□□□□ 0.83
CLN6-208ENST00000567060 GAKO14976 1311 aa20.24■□□□□ 0.83
CLN6-208ENST00000567060 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 GPR25O00155 361 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 MECOMQ03112 1051 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 CFAP100Q494V2 611 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 KBTBD3Q8NAB2 608 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 R3HDMLQ9H3Y0 253 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
CLN6-208ENST00000567060 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
CLN6-208ENST00000567060 MYH2Q9UKX2 1941 aa20.22■□□□□ 0.83
CLN6-208ENST00000567060 WNT10BO00744 389 aa20.22■□□□□ 0.83
CLN6-208ENST00000567060 IDH1O75874 414 aaKnown RBP20.22■□□□□ 0.83
CLN6-208ENST00000567060 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
CLN6-208ENST00000567060 GRIK5Q16478 980 aa20.22■□□□□ 0.83
CLN6-208ENST00000567060 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
CLN6-208ENST00000567060 NAA16Q6N069 864 aaPredicted RBP20.22■□□□□ 0.83
CLN6-208ENST00000567060 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
CLN6-208ENST00000567060 PDE4AP27815 886 aa20.21■□□□□ 0.83
CLN6-208ENST00000567060 RBM5P52756 815 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLN6-208ENST00000567060 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
CLN6-208ENST00000567060 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
CLN6-208ENST00000567060 MYH7P12883 1935 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 PLCG2P16885 1265 aa20.2■□□□□ 0.82
CLN6-208ENST00000567060 MKRN3Q13064 507 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms