RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
CMTM3-209ENST00000565003 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
CMTM3-209ENST00000565003 C1orf115Q9H7X2 142 aa12.42□□□□□ -0.42
CMTM3-209ENST00000565003 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
CMTM3-209ENST00000565003 INHBEP58166 350 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 TCP10Q12799 353 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 POLA2Q14181 598 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 MVPQ14764 893 aaKnown RBP12.41□□□□□ -0.42
CMTM3-209ENST00000565003 NOM1Q5C9Z4 860 aaKnown RBP12.41□□□□□ -0.42
CMTM3-209ENST00000565003 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 PTPN18Q99952 460 aa12.41□□□□□ -0.42
CMTM3-209ENST00000565003 GAKO14976 1311 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 PDS5AQ29RF7 1337 aaKnown RBP12.4□□□□□ -0.42
CMTM3-209ENST00000565003 ALDH1A1P00352 501 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 G3BP1Q13283 466 aaKnown RBP eCLIP12.4□□□□□ -0.42
CMTM3-209ENST00000565003 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 ZGPATQ8N5A5 531 aaKnown RBP12.4□□□□□ -0.42
CMTM3-209ENST00000565003 FAM151AQ8WW52 585 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 ABCF2Q9UG63 623 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 CSADQ9Y600 493 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 MYH2Q9UKX2 1941 aa12.4□□□□□ -0.42
CMTM3-209ENST00000565003 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
CMTM3-209ENST00000565003 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 MIGA2Q7L4E1 593 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 DZIP1Q86YF9 867 aaKnown RBP12.39□□□□□ -0.43
CMTM3-209ENST00000565003 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 ZNF384Q8TF68 577 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
CMTM3-209ENST00000565003 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 USP40Q9NVE5 1235 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 RFX7Q2KHR2 1363 aa12.39□□□□□ -0.43
CMTM3-209ENST00000565003 SPDYE5A6NIY4 337 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
CMTM3-209ENST00000565003 FKTNO75072 461 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 ARID4AP29374 1257 aaPredicted RBP12.38□□□□□ -0.43
CMTM3-209ENST00000565003 CRHR2Q13324 411 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 SPATA5Q8NB90 893 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 HOOK2Q96ED9 719 aa12.38□□□□□ -0.43
CMTM3-209ENST00000565003 CCL15-CCL14A0A0B4J2E2 113 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 INPP5BP32019 993 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 MCAMP43121 646 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 RGS19P49795 217 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 MECOMQ03112 1051 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 CCL15Q16663 113 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 MROH7-TTC4A0A0A0MT08 1334 aa12.37□□□□□ -0.43
CMTM3-209ENST00000565003 IRF6O14896 467 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 BTDP43251 543 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 RGS3P49796 1198 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 GTF2A2P52657 109 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 OS9Q13438 667 aaPredicted RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 PKN2Q16513 984 aaKnown RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 SPTY2D1Q68D10 685 aaPredicted RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 GPR108Q9NPR9 543 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 NOP58Q9Y2X3 529 aaKnown RBP12.36□□□□□ -0.43
CMTM3-209ENST00000565003 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
CMTM3-209ENST00000565003 GPR75-ASB3A0A0A6YYF3 556 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 ENTPD3O75355 529 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 SOX10P56693 466 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 RHBDL3P58872 404 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
CMTM3-209ENST00000565003 NSUN4Q96CB9 384 aaKnown RBP12.35□□□□□ -0.43
CMTM3-209ENST00000565003 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
CMTM3-209ENST00000565003 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 CAP1Q01518 475 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 PPIL2Q13356 520 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 PICALMQ13492 652 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms