RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
CLK3-216ENST00000564468 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
CLK3-216ENST00000564468 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
CLK3-216ENST00000564468 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
CLK3-216ENST00000564468 HOOK2Q96ED9 719 aa16.41■□□□□ 0.22
CLK3-216ENST00000564468 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
CLK3-216ENST00000564468 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
CLK3-216ENST00000564468 AOX1Q06278 1338 aa16.41■□□□□ 0.22
CLK3-216ENST00000564468 MYO5AQ9Y4I1 1855 aaKnown RBP16.4■□□□□ 0.22
CLK3-216ENST00000564468 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
CLK3-216ENST00000564468 SLC10A3P09131 477 aa16.4■□□□□ 0.22
CLK3-216ENST00000564468 MCAMP43121 646 aa16.4■□□□□ 0.22
CLK3-216ENST00000564468 DIXDC1Q155Q3 683 aa16.4■□□□□ 0.22
CLK3-216ENST00000564468 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
CLK3-216ENST00000564468 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
CLK3-216ENST00000564468 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
CLK3-216ENST00000564468 CCDC8Q9H0W5 538 aaPredicted RBP16.4■□□□□ 0.22
CLK3-216ENST00000564468 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
CLK3-216ENST00000564468 PRKG1Q13976 671 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
CLK3-216ENST00000564468 MOB2Q70IA6 237 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 AACSQ86V21 672 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 LRP2BPQ9P2M1 347 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
CLK3-216ENST00000564468 GAKO14976 1311 aa16.39■□□□□ 0.21
CLK3-216ENST00000564468 FAM155AB1AL88 458 aaPredicted RBP16.38■□□□□ 0.21
CLK3-216ENST00000564468 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
CLK3-216ENST00000564468 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
CLK3-216ENST00000564468 RAI14Q9P0K7 980 aa16.38■□□□□ 0.21
CLK3-216ENST00000564468 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 MAST2Q6P0Q8 1798 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 APBB1O00213 710 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
CLK3-216ENST00000564468 IFIT2P09913 472 aaKnown RBP16.37■□□□□ 0.21
CLK3-216ENST00000564468 CACNB3P54284 484 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 MECOMQ03112 1051 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 LDLRAD1Q5T700 205 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 PI16Q6UXB8 463 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 FAM151AQ8WW52 585 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 TEPSINQ96N21 525 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 NOL10Q9BSC4 688 aaKnown RBP16.37■□□□□ 0.21
CLK3-216ENST00000564468 TMEM39BQ9GZU3 492 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
CLK3-216ENST00000564468 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
CLK3-216ENST00000564468 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
CLK3-216ENST00000564468 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
CLK3-216ENST00000564468 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
CLK3-216ENST00000564468 ANKRD13AQ8IZ07 590 aa16.36■□□□□ 0.21
CLK3-216ENST00000564468 NSUN4Q96CB9 384 aaKnown RBP16.36■□□□□ 0.21
CLK3-216ENST00000564468 SLC10A4Q96EP9 437 aa16.36■□□□□ 0.21
CLK3-216ENST00000564468 SNRKQ9NRH2 765 aa16.36■□□□□ 0.21
CLK3-216ENST00000564468 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
CLK3-216ENST00000564468 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
CLK3-216ENST00000564468 BTDP43251 543 aa16.35■□□□□ 0.21
CLK3-216ENST00000564468 DCAF15Q66K64 600 aa16.35■□□□□ 0.21
CLK3-216ENST00000564468 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
CLK3-216ENST00000564468 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
CLK3-216ENST00000564468 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
CLK3-216ENST00000564468 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
CLK3-216ENST00000564468 GPR75-ASB3A0A0A6YYF3 556 aa16.34■□□□□ 0.21
CLK3-216ENST00000564468 ENTPD3O75355 529 aa16.34■□□□□ 0.21
CLK3-216ENST00000564468 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
CLK3-216ENST00000564468 ZAP70P43403 619 aa16.34■□□□□ 0.21
CLK3-216ENST00000564468 AAMPQ13685 434 aa16.34■□□□□ 0.21
CLK3-216ENST00000564468 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
CLK3-216ENST00000564468 IDI2Q9BXS1 227 aa16.34■□□□□ 0.21
CLK3-216ENST00000564468 DOCK2Q92608 1830 aa16.33■□□□□ 0.21
CLK3-216ENST00000564468 TNRC18O15417 2968 aaPredicted RBP16.33■□□□□ 0.21
CLK3-216ENST00000564468 BAG3O95817 575 aa16.33■□□□□ 0.2
CLK3-216ENST00000564468 PLCG2P16885 1265 aa16.33■□□□□ 0.2
CLK3-216ENST00000564468 TCP10Q12799 353 aa16.33■□□□□ 0.2
CLK3-216ENST00000564468 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
CLK3-216ENST00000564468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
CLK3-216ENST00000564468 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
CLK3-216ENST00000564468 LAMB1P07942 1786 aa16.33■□□□□ 0.2
CLK3-216ENST00000564468 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
CLK3-216ENST00000564468 MAP3K9P80192 1104 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 CSRNP1Q96S65 589 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 FZD1Q9UP38 647 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 CSADQ9Y600 493 aa16.32■□□□□ 0.2
CLK3-216ENST00000564468 CDK5RAP2Q96SN8 1893 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
CLK3-216ENST00000564468 TRPA1O75762 1119 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 RGS3P49796 1198 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 INHBEP58166 350 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 NFIAQ12857 509 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 SPRYD7Q5W111 196 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 ZNF341Q9BYN7 854 aa16.31■□□□□ 0.2
CLK3-216ENST00000564468 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms