RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
USB1-205ENST00000561743 ALDH1A1P00352 501 aa16.71■□□□□ 0.27
USB1-205ENST00000561743 CDC42EP5Q6NZY7 148 aa16.71■□□□□ 0.27
USB1-205ENST00000561743 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
USB1-205ENST00000561743 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
USB1-205ENST00000561743 ZGPATQ8N5A5 531 aaKnown RBP16.71■□□□□ 0.27
USB1-205ENST00000561743 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
USB1-205ENST00000561743 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
USB1-205ENST00000561743 POLA2Q14181 598 aa16.7■□□□□ 0.26
USB1-205ENST00000561743 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
USB1-205ENST00000561743 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
USB1-205ENST00000561743 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
USB1-205ENST00000561743 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
USB1-205ENST00000561743 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 NFIAQ12857 509 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
USB1-205ENST00000561743 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 SSH3Q8TE77 659 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 C1orf115Q9H7X2 142 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 GAKO14976 1311 aa16.69■□□□□ 0.26
USB1-205ENST00000561743 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 TESPA1A2RU30 521 aaPredicted RBP16.68■□□□□ 0.26
USB1-205ENST00000561743 ZBTB7BO15156 539 aaPredicted RBP16.68■□□□□ 0.26
USB1-205ENST00000561743 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 TCP10Q12799 353 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
USB1-205ENST00000561743 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 PTPN18Q99952 460 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 ABCF2Q9UG63 623 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 CSADQ9Y600 493 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 SNCAIPQ9Y6H5 919 aa16.68■□□□□ 0.26
USB1-205ENST00000561743 DCAF15Q66K64 600 aa16.67■□□□□ 0.26
USB1-205ENST00000561743 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
USB1-205ENST00000561743 ZKSCAN4Q969J2 545 aaPredicted RBP16.67■□□□□ 0.26
USB1-205ENST00000561743 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
USB1-205ENST00000561743 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
USB1-205ENST00000561743 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 FKTNO75072 461 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 ARID4AP29374 1257 aaPredicted RBP16.66■□□□□ 0.26
USB1-205ENST00000561743 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 MIGA2Q7L4E1 593 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 CDK5RAP2Q96SN8 1893 aa16.66■□□□□ 0.26
USB1-205ENST00000561743 MCAMP43121 646 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 GTF2A2P52657 109 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 MECOMQ03112 1051 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 CRHR2Q13324 411 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
USB1-205ENST00000561743 SPTY2D1Q68D10 685 aaPredicted RBP16.65■□□□□ 0.26
USB1-205ENST00000561743 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 PANK1Q8TE04 598 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 FAM163AQ96GL9 167 aaPredicted RBP16.65■□□□□ 0.26
USB1-205ENST00000561743 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 MROH7-TTC4A0A0A0MT08 1334 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
USB1-205ENST00000561743 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.26
USB1-205ENST00000561743 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
USB1-205ENST00000561743 RGS19P49795 217 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 ERO1BQ86YB8 467 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 GPR108Q9NPR9 543 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 NOP58Q9Y2X3 529 aaKnown RBP16.64■□□□□ 0.25
USB1-205ENST00000561743 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
USB1-205ENST00000561743 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 ENTPD3O75355 529 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 INPP5BP32019 993 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 BTDP43251 543 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 RGS3P49796 1198 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
USB1-205ENST00000561743 CCL15Q16663 113 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 TBC1D9Q6ZT07 1266 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 HPS5Q9UPZ3 1129 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 TNRC18O15417 2968 aaPredicted RBP16.63■□□□□ 0.25
USB1-205ENST00000561743 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 HTTP42858 3142 aa16.63■□□□□ 0.25
USB1-205ENST00000561743 PTPRFP10586 1907 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 IRF6O14896 467 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
USB1-205ENST00000561743 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 PPIL2Q13356 520 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 CEP85Q6P2H3 762 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 FAM43AQ8N2R8 423 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 NSUN4Q96CB9 384 aaKnown RBP16.62■□□□□ 0.25
USB1-205ENST00000561743 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
USB1-205ENST00000561743 DDX4Q9NQI0 724 aaKnown RBP16.62■□□□□ 0.25
USB1-205ENST00000561743 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms