RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RRP1P56182 461 aaKnown RBP15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 CDC42EP5Q6NZY7 148 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 RASAL3Q86YV0 1011 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 CLASRPQ8N2M8 674 aaKnown RBP15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 SLC10A4Q96EP9 437 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 DBNLQ9UJU6 430 aaKnown RBP15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 MYH2Q9UKX2 1941 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 THSD7BQ9C0I4 1608 aa15.89■□□□□ 0.13
CTDSPL2-209ENST00000560620 ZBTB22O15209 634 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 LBX1P52954 281 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 GSTO1P78417 241 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 MECOMQ03112 1051 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 TCP10Q12799 353 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
CTDSPL2-209ENST00000560620 IFIT2P09913 472 aaKnown RBP15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 BTDP43251 543 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 FKBP1CQ5VVH2 108 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 CDAN1Q8IWY9 1227 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 HOOK2Q96ED9 719 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 SSC5DA1L4H1 1573 aa15.87■□□□□ 0.13
CTDSPL2-209ENST00000560620 CA12O43570 354 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 USP2O75604 605 aaPredicted RBP15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 LDHCP07864 332 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 ZAP70P43403 619 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 LDLRAD1Q5T700 205 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 ANKRD13AQ8IZ07 590 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 CLMNQ96JQ2 1002 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 TEPSINQ96N21 525 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 MROH7-TTC4A0A0A0MT08 1334 aa15.86■□□□□ 0.13
CTDSPL2-209ENST00000560620 NFIAQ12857 509 aa15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 ZSCAN29Q8IWY8 852 aaPredicted RBP15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 FAM151AQ8WW52 585 aa15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 NSUN4Q96CB9 384 aaKnown RBP15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 CSRNP1Q96S65 589 aa15.85■□□□□ 0.13
CTDSPL2-209ENST00000560620 TRPA1O75762 1119 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 CYP2E1P05181 493 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 HSPA8P11142 646 aaKnown RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 PICALMQ13492 652 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 DCAF15Q66K64 600 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 NAA16Q6N069 864 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 REM2Q8IYK8 340 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 ZNF512BQ96KM6 892 aaPredicted RBP15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 ELP3Q9H9T3 547 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 CSADQ9Y600 493 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 GAKO14976 1311 aa15.84■□□□□ 0.13
CTDSPL2-209ENST00000560620 IDH1O75874 414 aaKnown RBP15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 RGS3P49796 1198 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 SREBF2Q12772 1141 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 MIGA2Q7L4E1 593 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 TNS4Q8IZW8 715 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 PRDM10Q9NQV6 1147 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 NDUFB9Q9Y6M9 179 aa15.83■□□□□ 0.12
CTDSPL2-209ENST00000560620 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 GPR75-ASB3A0A0A6YYF3 556 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 UNCXA6NJT0 531 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 SPRYD7Q5W111 196 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 WRNIP1Q96S55 665 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 FAM198AQ9UFP1 575 aa15.82■□□□□ 0.12
CTDSPL2-209ENST00000560620 BAG3O95817 575 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 WNK4Q96J92 1243 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 CRBNQ96SW2 442 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 DNAJC2Q99543 621 aaKnown RBP15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 RPAP1Q9BWH6 1393 aaPredicted RBP15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 IDI2Q9BXS1 227 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZNF341Q9BYN7 854 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 PIH1D3Q9NQM4 214 aaKnown RBP15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 RNF186Q9NXI6 227 aa15.81■□□□□ 0.12
CTDSPL2-209ENST00000560620 SMARCA5O60264 1052 aaPredicted RBP15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 ENTPD3O75355 529 aa15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZBTB48P10074 688 aaPredicted RBP15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 VGLL4Q14135 290 aa15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZFPM1Q8IX07 1006 aa15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 TEX11Q8IYF3 940 aa15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 ZKSCAN4Q969J2 545 aaPredicted RBP15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 OPTNQ96CV9 577 aa15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 AATFQ9NY61 560 aaKnown RBP eCLIP15.8■□□□□ 0.12
CTDSPL2-209ENST00000560620 OTOFQ9HC10 1997 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 MANSC4A6NHS7 340 aaPredicted RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 WDHD1O75717 1129 aaPredicted RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 CYP7A1P22680 504 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 MAP3K12Q12852 859 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 TTF1Q15361 905 aaPredicted RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 OTUD5Q96G74 571 aa15.79■□□□□ 0.12
CTDSPL2-209ENST00000560620 ANTXR1Q9H6X2 564 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms