RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 GNAT2P19087 354 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 CYP7A1P22680 504 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 RBM25P49756 843 aaKnown RBP7.7□□□□□ -1.18
SPG11-221ENST00000560299 CXCL9Q07325 125 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 STRIP1Q5VSL9 837 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 TTLL5Q6EMB2 1281 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
SPG11-221ENST00000560299 OLFM4Q6UX06 510 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 MAGEB6Q8N7X4 407 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 FBXW7Q969H0 707 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 AIDAQ96BJ3 306 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 GPR101Q96P66 508 aaPredicted RBP7.7□□□□□ -1.18
SPG11-221ENST00000560299 MRIQ9BWK5 157 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 CTNNA3Q9UI47 895 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 PSME4Q14997 1843 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 MAST3O60307 1309 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 CCDC171Q6TFL3 1326 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 FAM205AQ6ZU69 1335 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
SPG11-221ENST00000560299 POTECB2RU33 542 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 ECE2O60344 883 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 BAG3O95817 575 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 ZNF280AP59817 542 aaPredicted RBP7.69□□□□□ -1.18
SPG11-221ENST00000560299 ANAPC15P60006 121 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 GTF2IP78347 998 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 AOC3Q16853 763 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 DOK7Q18PE1 504 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 MFSD14BQ5SR56 506 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 CIAPIN1Q6FI81 312 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 USP50Q70EL3 339 aaPredicted RBP7.69□□□□□ -1.18
SPG11-221ENST00000560299 GMLQ99445 158 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 DSCC1Q9BVC3 393 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 NACAP1Q9BZK3 213 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 DAXXQ9UER7 740 aaPredicted RBP7.69□□□□□ -1.18
SPG11-221ENST00000560299 COL4A5P29400 1685 aa7.69□□□□□ -1.18
SPG11-221ENST00000560299 MAGEB6P1A0A0J9YX57 407 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 USP17L3A6NCW0 530 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 USP17L4A6NCW7 530 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 GPAA1O43292 621 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 APPP05067 770 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 PLCG2P16885 1265 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 HSPA4P34932 840 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 HDLBPQ00341 1268 aaKnown RBP7.68□□□□□ -1.18
SPG11-221ENST00000560299 MECOMQ03112 1051 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 USP17L1Q7RTZ2 530 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 MAP4K1Q92918 833 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 OSBP2Q969R2 916 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 NSUN4Q96CB9 384 aaKnown RBP7.68□□□□□ -1.18
SPG11-221ENST00000560299 LSG1Q9H089 658 aaKnown RBP7.68□□□□□ -1.18
SPG11-221ENST00000560299 DBNDD1Q9H9R9 158 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 GPRC5DQ9NZD1 345 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 HACL1Q9UJ83 578 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 ADAMTSL1Q8N6G6 1762 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 DOCK2Q92608 1830 aa7.68□□□□□ -1.18
SPG11-221ENST00000560299 RPAP1Q9BWH6 1393 aaPredicted RBP7.68□□□□□ -1.18
SPG11-221ENST00000560299 MYO5AQ9Y4I1 1855 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 TCRBV5S4A2TA0A5A2 114 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 SPDYE4A6NLX3 237 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 YDJCA8MPS7 323 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 PATL2C9JE40 543 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 HSPD1P10809 573 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 PSMA5P28066 241 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 PRDX5P30044 214 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 SCNN1DP51172 638 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 BECN1Q14457 450 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 KRT32Q14532 448 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 RABEP1Q15276 862 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 DACT2Q5SW24 774 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 CCDC129Q6ZRS4 1044 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 ZNF589Q86UQ0 364 aaPredicted RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 LDHDQ86WU2 507 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 MTMR14Q8NCE2 650 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 SMC1BQ8NDV3 1235 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 STRBPQ96SI9 672 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 SEC62Q99442 399 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 PUS7LQ9H0K6 701 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 TAF1DQ9H5J8 278 aaPredicted RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 ADARB2Q9NS39 739 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 JAG2Q9Y219 1238 aa7.67□□□□□ -1.18
SPG11-221ENST00000560299 RBM8AQ9Y5S9 174 aaKnown RBP7.67□□□□□ -1.18
SPG11-221ENST00000560299 POTEFA5A3E0 1075 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 M0R2C6 588 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 DDNO94850 711 aaPredicted RBP7.66□□□□□ -1.18
SPG11-221ENST00000560299 MBD4O95243 580 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
SPG11-221ENST00000560299 PTH1RQ03431 593 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 NECTIN1Q15223 517 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 IMMTQ16891 758 aaKnown RBP7.66□□□□□ -1.18
SPG11-221ENST00000560299 RSBN1LQ6PCB5 846 aaPredicted RBP7.66□□□□□ -1.18
SPG11-221ENST00000560299 AMOTL1Q8IY63 956 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 CRNKL1Q9BZJ0 848 aaKnown RBP7.66□□□□□ -1.18
SPG11-221ENST00000560299 NAPBQ9H115 298 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 IL25Q9H293 177 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 HDAC9Q9UKV0 1011 aa7.66□□□□□ -1.18
SPG11-221ENST00000560299 SLC4A4Q9Y6R1 1079 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms