RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 VEZTQ9HBM0 779 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 TTF2Q9UNY4 1162 aaKnown RBP7.96□□□□□ -1.14
TMEM260-209ENST00000556079 FAM205AQ6ZU69 1335 aa7.96□□□□□ -1.14
TMEM260-209ENST00000556079 SLC10A3P09131 477 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 RBM5P52756 815 aaKnown RBP eCLIP7.95□□□□□ -1.14
TMEM260-209ENST00000556079 TIMM10P62072 90 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 DLGAP5Q15398 846 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 DIXDC1Q155Q3 683 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 ITPRIPQ8IWB1 547 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 CLMNQ96JQ2 1002 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 YTHDC1Q96MU7 727 aaKnown RBP7.95□□□□□ -1.14
TMEM260-209ENST00000556079 TDRD3Q9H7E2 651 aaKnown RBP7.95□□□□□ -1.14
TMEM260-209ENST00000556079 SAGE1Q9NXZ1 904 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 MYH2Q9UKX2 1941 aa7.95□□□□□ -1.14
TMEM260-209ENST00000556079 POTEMA6NI47 508 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 TCP10L2B9ZVM9 353 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 GNAI2P04899 355 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 SLC5A1P13866 664 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 CRKP46108 304 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 NBPF12Q5TAG4 269 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-209ENST00000556079 VPS37DQ86XT2 251 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 RASAL3Q86YV0 1011 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 DZIP1LQ8IYY4 767 aaKnown RBP7.94□□□□□ -1.14
TMEM260-209ENST00000556079 OGFOD1Q8N543 542 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 TLR7Q9NYK1 1049 aaKnown RBP7.94□□□□□ -1.14
TMEM260-209ENST00000556079 ZNF70Q9UC06 446 aaPredicted RBP7.94□□□□□ -1.14
TMEM260-209ENST00000556079 STK24Q9Y6E0 443 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 MYO3BQ8WXR4 1341 aa7.94□□□□□ -1.14
TMEM260-209ENST00000556079 AKAP11Q9UKA4 1901 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 IPO8O15397 1037 aaKnown RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 FRAT2O75474 233 aaPredicted RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 CIAO1O76071 339 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 GNAI3P08754 354 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 IFIT1P09914 478 aaKnown RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 PRDX5P30044 214 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 MTX1Q13505 466 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 RASGRF1Q13972 1273 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 TTLL12Q14166 644 aaPredicted RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 POTEGQ6S5H5 508 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 CTU1Q7Z7A3 348 aaKnown RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 FTSJ3Q8IY81 847 aaKnown RBP7.93□□□□□ -1.14
TMEM260-209ENST00000556079 LPIN2Q92539 896 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 TMEM39BQ9GZU3 492 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 BCL11AQ9H165 835 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 DEFB129Q9H1M3 183 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 CEP126Q9P2H0 1117 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 HDAC9Q9UKV0 1011 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 COG6Q9Y2V7 657 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 PITPNM2Q9BZ72 1349 aa7.93□□□□□ -1.14
TMEM260-209ENST00000556079 AK9Q5TCS8 1911 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 A0A1B0GUL7 405 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 ZBTB7BO15156 539 aaPredicted RBP7.92□□□□□ -1.14
TMEM260-209ENST00000556079 TBC1D8O95759 1140 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 IL15P40933 162 aaPredicted RBP7.92□□□□□ -1.14
TMEM260-209ENST00000556079 RASA3Q14644 834 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 CAVIN4Q5BKX8 364 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 CCDC102BQ68D86 513 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 TBC1D9Q6ZT07 1266 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 MTMR14Q8NCE2 650 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 ZNF384Q8TF68 577 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 XAGE2Q96GT9 111 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 SNRKQ9NRH2 765 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 HPS5Q9UPZ3 1129 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
TMEM260-209ENST00000556079 APBB1O00213 710 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 STK25O00506 426 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 GJA5P36382 358 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 FKBP1AP62942 108 aaKnown RBP7.91□□□□□ -1.14
TMEM260-209ENST00000556079 NFIAQ12857 509 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 APOBEC3HQ6NTF7 200 aaKnown RBP7.91□□□□□ -1.14
TMEM260-209ENST00000556079 CEP85Q6P2H3 762 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 APOBEC3FQ8IUX4 373 aaKnown RBP7.91□□□□□ -1.14
TMEM260-209ENST00000556079 ZFPM1Q8IX07 1006 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 SIRT2Q8IXJ6 389 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 ZNF296Q8WUU4 475 aaPredicted RBP7.91□□□□□ -1.14
TMEM260-209ENST00000556079 TEPSINQ96N21 525 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 DBNDD2Q9BQY9 259 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 R3HDMLQ9H3Y0 253 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 RCAN3Q9UKA8 241 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 ANGEL1Q9UNK9 670 aaKnown RBP7.91□□□□□ -1.14
TMEM260-209ENST00000556079 EXOC6BQ9Y2D4 811 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 DAGLAQ9Y4D2 1042 aa7.91□□□□□ -1.14
TMEM260-209ENST00000556079 SZT2Q5T011 3432 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 CDK5RAP2Q96SN8 1893 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 ZSWIM8A7E2V4 1837 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 ATP8B2P98198 1209 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-209ENST00000556079 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
TMEM260-209ENST00000556079 CDC42EP5Q6NZY7 148 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 SSH3Q8TE77 659 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 HMG20BQ9P0W2 317 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
TMEM260-209ENST00000556079 DOCK2Q92608 1830 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms