RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FKBP1CQ5VVH2 108 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 HOOK2Q96ED9 719 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 BEGAINQ9BUH8 593 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 USP40Q9NVE5 1235 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 ZBTB47Q9UFB7 747 aaPredicted RBP14.77□□□□□ -0.05
SRP54-206ENST00000555317 ANGEL1Q9UNK9 670 aaKnown RBP14.77□□□□□ -0.05
SRP54-206ENST00000555317 MAST2Q6P0Q8 1798 aa14.77□□□□□ -0.05
SRP54-206ENST00000555317 UBE2Q2LH0YL09 131 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 BTDP43251 543 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
SRP54-206ENST00000555317 MAP2K1Q02750 393 aaPredicted RBP14.76□□□□□ -0.05
SRP54-206ENST00000555317 NOGQ13253 232 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 CDC42EP5Q6NZY7 148 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 FAM83AQ86UY5 434 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 TMEM39BQ9GZU3 492 aa14.76□□□□□ -0.05
SRP54-206ENST00000555317 GAKO14976 1311 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 MAP2K2P36507 400 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 ZAP70P43403 619 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 NBPF12Q5TAG4 269 aaPredicted RBP14.75□□□□□ -0.05
SRP54-206ENST00000555317 NAA16Q6N069 864 aaPredicted RBP14.75□□□□□ -0.05
SRP54-206ENST00000555317 MOB2Q70IA6 237 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
SRP54-206ENST00000555317 GPATCH3Q96I76 525 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 DCTPP1Q9H773 170 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
SRP54-206ENST00000555317 PCDHB15Q9Y5E8 787 aa14.75□□□□□ -0.05
SRP54-206ENST00000555317 IGSF3O75054 1194 aa14.74□□□□□ -0.05
SRP54-206ENST00000555317 AOC2O75106 756 aa14.74□□□□□ -0.05
SRP54-206ENST00000555317 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 CYP2E1P05181 493 aaPredicted RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 HSPA1AP0DMV8 641 aaKnown RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 HSPA1BP0DMV9 641 aaKnown RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 TTF1Q15361 905 aaPredicted RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
SRP54-206ENST00000555317 THSD7BQ9C0I4 1608 aa14.74□□□□□ -0.05
SRP54-206ENST00000555317 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
SRP54-206ENST00000555317 SMARCA5O60264 1052 aaPredicted RBP14.73□□□□□ -0.05
SRP54-206ENST00000555317 BAG3O95817 575 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 SLC10A3P09131 477 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 TCP10Q12799 353 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 MAP3K12Q12852 859 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 DCAF15Q66K64 600 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 DNAJC2Q99543 621 aaKnown RBP14.73□□□□□ -0.05
SRP54-206ENST00000555317 MYO5AQ9Y4I1 1855 aaKnown RBP14.73□□□□□ -0.05
SRP54-206ENST00000555317 SSC5DA1L4H1 1573 aa14.73□□□□□ -0.05
SRP54-206ENST00000555317 GPR75-ASB3A0A0A6YYF3 556 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
SRP54-206ENST00000555317 PLCG2P16885 1265 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 PICALMQ13492 652 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 RASAL3Q86YV0 1011 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 ZSCAN29Q8IWY8 852 aaPredicted RBP14.72□□□□□ -0.05
SRP54-206ENST00000555317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
SRP54-206ENST00000555317 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 TEPSINQ96N21 525 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 PIH1D3Q9NQM4 214 aaKnown RBP14.72□□□□□ -0.05
SRP54-206ENST00000555317 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
SRP54-206ENST00000555317 UNCXA6NJT0 531 aa14.71□□□□□ -0.05
SRP54-206ENST00000555317 RGS3P49796 1198 aa14.71□□□□□ -0.05
SRP54-206ENST00000555317 NFIAQ12857 509 aa14.71□□□□□ -0.05
SRP54-206ENST00000555317 SLC10A4Q96EP9 437 aa14.71□□□□□ -0.05
SRP54-206ENST00000555317 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
SRP54-206ENST00000555317 FAM155AB1AL88 458 aaPredicted RBP14.7□□□□□ -0.06
SRP54-206ENST00000555317 GOLIM4O00461 696 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 ENTPD3O75355 529 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 ATP5JP18859 108 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 CYP7A1P22680 504 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 MAP3K11Q16584 847 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 TMED8Q6PL24 325 aaPredicted RBP14.7□□□□□ -0.06
SRP54-206ENST00000555317 CDAN1Q8IWY9 1227 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 TEX11Q8IYF3 940 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
SRP54-206ENST00000555317 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 MAGEB6Q8N7X4 407 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 IDI2Q9BXS1 227 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 WBP1LQ9NX94 342 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 AATFQ9NY61 560 aaKnown RBP eCLIP14.7□□□□□ -0.06
SRP54-206ENST00000555317 CSADQ9Y600 493 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 DOCK2Q92608 1830 aa14.7□□□□□ -0.06
SRP54-206ENST00000555317 OTOFQ9HC10 1997 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 USP2O75604 605 aaPredicted RBP14.69□□□□□ -0.06
SRP54-206ENST00000555317 KIF23Q02241 960 aaPredicted RBP14.69□□□□□ -0.06
SRP54-206ENST00000555317 MKRN3Q13064 507 aaKnown RBP14.69□□□□□ -0.06
SRP54-206ENST00000555317 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
SRP54-206ENST00000555317 LDLRAD1Q5T700 205 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 CERS3Q8IU89 383 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 GCC1Q96CN9 775 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 CSRNP1Q96S65 589 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
SRP54-206ENST00000555317 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 PAG1Q9NWQ8 432 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 FAM198AQ9UFP1 575 aa14.69□□□□□ -0.06
SRP54-206ENST00000555317 CA12O43570 354 aa14.68□□□□□ -0.06
SRP54-206ENST00000555317 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
SRP54-206ENST00000555317 CTCFP49711 727 aaPredicted RBP14.68□□□□□ -0.06
SRP54-206ENST00000555317 WRNIP1Q96S55 665 aa14.68□□□□□ -0.06
SRP54-206ENST00000555317 ZNF341Q9BYN7 854 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms