RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
TDP1-208ENST00000553989 DCAF15Q66K64 600 aa11.04□□□□□ -0.64
TDP1-208ENST00000553989 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
TDP1-208ENST00000553989 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
TDP1-208ENST00000553989 ANKRD44Q8N8A2 993 aa11.04□□□□□ -0.64
TDP1-208ENST00000553989 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
TDP1-208ENST00000553989 SPDYE5A6NIY4 337 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 CETPP11597 493 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 SLC5A1P13866 664 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
TDP1-208ENST00000553989 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 ERO1BQ86YB8 467 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 ARMC5Q96C12 935 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 ZDHHC15Q96MV8 337 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
TDP1-208ENST00000553989 EN2P19622 333 aaPredicted RBP11.02□□□□□ -0.65
TDP1-208ENST00000553989 SNAPC2Q13487 334 aa11.02□□□□□ -0.65
TDP1-208ENST00000553989 MIGA2Q7L4E1 593 aa11.02□□□□□ -0.65
TDP1-208ENST00000553989 FAM83AQ86UY5 434 aa11.02□□□□□ -0.65
TDP1-208ENST00000553989 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.65
TDP1-208ENST00000553989 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
TDP1-208ENST00000553989 SNCAIPQ9Y6H5 919 aa11.02□□□□□ -0.65
TDP1-208ENST00000553989 E9PSI1 815 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 EYA2O00167 538 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 IRF6O14896 467 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 GSE1Q14687 1217 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 APOBEC3HQ6NTF7 200 aaKnown RBP11.01□□□□□ -0.65
TDP1-208ENST00000553989 HHIPL2Q6UWX4 724 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 WDR66Q8TBY9 1149 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 SSH1Q8WYL5 1049 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 LPIN2Q92539 896 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 ZNF333Q96JL9 665 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 ZNF341Q9BYN7 854 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 SIL1Q9H173 461 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
TDP1-208ENST00000553989 RPAP1Q9BWH6 1393 aaPredicted RBP11.01□□□□□ -0.65
TDP1-208ENST00000553989 BTBD19C9JJ37 291 aa11□□□□□ -0.65
TDP1-208ENST00000553989 TLR2O60603 784 aa11□□□□□ -0.65
TDP1-208ENST00000553989 CAP1Q01518 475 aa11□□□□□ -0.65
TDP1-208ENST00000553989 TCP10Q12799 353 aa11□□□□□ -0.65
TDP1-208ENST00000553989 PPIL2Q13356 520 aa11□□□□□ -0.65
TDP1-208ENST00000553989 FKBP1CQ5VVH2 108 aa11□□□□□ -0.65
TDP1-208ENST00000553989 GOLGA6L2Q8N9W4 650 aaPredicted RBP11□□□□□ -0.65
TDP1-208ENST00000553989 MRIQ9BWK5 157 aa11□□□□□ -0.65
TDP1-208ENST00000553989 ARHGAP39Q9C0H5 1083 aa11□□□□□ -0.65
TDP1-208ENST00000553989 USP44Q9H0E7 712 aa11□□□□□ -0.65
TDP1-208ENST00000553989 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
TDP1-208ENST00000553989 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
TDP1-208ENST00000553989 GNL3LQ9NVN8 582 aaKnown RBP11□□□□□ -0.65
TDP1-208ENST00000553989 ZNF521Q96K83 1311 aa11□□□□□ -0.65
TDP1-208ENST00000553989 LDHBP07195 334 aaKnown RBP10.99□□□□□ -0.65
TDP1-208ENST00000553989 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
TDP1-208ENST00000553989 FGFR2P21802 821 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 INPP5BP32019 993 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 LACTBP83111 547 aaPredicted RBP10.99□□□□□ -0.65
TDP1-208ENST00000553989 PPATQ06203 517 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 ATP2B3Q16720 1220 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
TDP1-208ENST00000553989 DAGLAQ9Y4D2 1042 aa10.99□□□□□ -0.65
TDP1-208ENST00000553989 RBBP6Q7Z6E9 1792 aaKnown RBP10.98□□□□□ -0.65
TDP1-208ENST00000553989 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 PRDX5P30044 214 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
TDP1-208ENST00000553989 HABP4Q5JVS0 413 aaKnown RBP10.98□□□□□ -0.65
TDP1-208ENST00000553989 FAM151AQ8WW52 585 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 CPA4Q9UI42 421 aa10.98□□□□□ -0.65
TDP1-208ENST00000553989 KIAA0100Q14667 2235 aaKnown RBP10.98□□□□□ -0.65
TDP1-208ENST00000553989 PDHXO00330 501 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
TDP1-208ENST00000553989 GNRH1P01148 92 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 RFX5P48382 616 aaPredicted RBP10.97□□□□□ -0.65
TDP1-208ENST00000553989 PRMT2P55345 433 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 NFIAQ12857 509 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 ALDH1L2Q3SY69 923 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 CDC42EP5Q6NZY7 148 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 ZSCAN29Q8IWY8 852 aaPredicted RBP10.97□□□□□ -0.65
TDP1-208ENST00000553989 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 RAET1EQ8TD07 263 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 DENND2AQ9ULE3 1009 aa10.97□□□□□ -0.65
TDP1-208ENST00000553989 AK9Q5TCS8 1911 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 CIAO1O76071 339 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 HOXD10P28358 340 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 PSMC4P43686 418 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 ATG9AQ7Z3C6 839 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 ANKRD23Q86SG2 305 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 DZIP1Q86YF9 867 aaKnown RBP10.96□□□□□ -0.65
TDP1-208ENST00000553989 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
TDP1-208ENST00000553989 PARK7Q99497 189 aaKnown RBP10.96□□□□□ -0.65
TDP1-208ENST00000553989 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
TDP1-208ENST00000553989 HDAC5Q9UQL6 1122 aa10.96□□□□□ -0.65
TDP1-208ENST00000553989 HTTP42858 3142 aa10.96□□□□□ -0.66
TDP1-208ENST00000553989 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
TDP1-208ENST00000553989 MYPNQ86TC9 1320 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms