RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 COL13A1Q5TAT6 717 aaPredicted RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 MRIQ9BWK5 157 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
LINC00517-201ENST00000553396 PDS5AQ29RF7 1337 aaKnown RBP12.55□□□□□ -0.4
LINC00517-201ENST00000553396 ZBTB22O15209 634 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 HMMRO75330 724 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 LBX1P52954 281 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 TBC1D9Q6ZT07 1266 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 SIRT2Q8IXJ6 389 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 SNRKQ9NRH2 765 aa12.54□□□□□ -0.4
LINC00517-201ENST00000553396 DBNLQ9UJU6 430 aaKnown RBP12.54□□□□□ -0.4
LINC00517-201ENST00000553396 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 HSPA8P11142 646 aaKnown RBP12.53□□□□□ -0.4
LINC00517-201ENST00000553396 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
LINC00517-201ENST00000553396 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 AACSQ86V21 672 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 CLMNQ96JQ2 1002 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
LINC00517-201ENST00000553396 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
LINC00517-201ENST00000553396 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
LINC00517-201ENST00000553396 MECOMQ03112 1051 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 TCP10Q12799 353 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 NFIAQ12857 509 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 HSP90AB4PQ58FF6 505 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 RAI14Q9P0K7 980 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 GAKO14976 1311 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 CASP8AP2Q9UKL3 1982 aa12.52□□□□□ -0.41
LINC00517-201ENST00000553396 DOCK2Q92608 1830 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
LINC00517-201ENST00000553396 BTDP43251 543 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 MAP3K11Q16584 847 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 ZNF384Q8TF68 577 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
LINC00517-201ENST00000553396 FKBP1CQ5VVH2 108 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 NSUN4Q96CB9 384 aaKnown RBP12.5□□□□□ -0.41
LINC00517-201ENST00000553396 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 SLC10A4Q96EP9 437 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 CSRNP1Q96S65 589 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
LINC00517-201ENST00000553396 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
LINC00517-201ENST00000553396 CA12O43570 354 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 TRPA1O75762 1119 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
LINC00517-201ENST00000553396 ZAP70P43403 619 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
LINC00517-201ENST00000553396 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 PRDM10Q9NQV6 1147 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
LINC00517-201ENST00000553396 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 LAMB1P07942 1786 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 RGS3P49796 1198 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 GSTO1P78417 241 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 PICALMQ13492 652 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 ZFPM1Q8IX07 1006 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
LINC00517-201ENST00000553396 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 PIH1D3Q9NQM4 214 aaKnown RBP12.48□□□□□ -0.41
LINC00517-201ENST00000553396 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
LINC00517-201ENST00000553396 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 WDHD1O75717 1129 aaPredicted RBP12.47□□□□□ -0.41
LINC00517-201ENST00000553396 LDHCP07864 332 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
LINC00517-201ENST00000553396 VGLL4Q14135 290 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 NAA16Q6N069 864 aaPredicted RBP12.47□□□□□ -0.41
LINC00517-201ENST00000553396 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms