RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ATG9AQ7Z3C6 839 aa14.82□□□□□ -0.04
CKAP4-202ENST00000552828 WDR66Q8TBY9 1149 aa14.82□□□□□ -0.04
CKAP4-202ENST00000552828 RBBP6Q7Z6E9 1792 aaKnown RBP14.81□□□□□ -0.04
CKAP4-202ENST00000552828 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 ZBTB22O15209 634 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 PPATQ06203 517 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 ALDH1L2Q3SY69 923 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 FAM151AQ8WW52 585 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 ZNF112Q9UJU3 913 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 PTCH2Q9Y6C5 1203 aa14.81□□□□□ -0.04
CKAP4-202ENST00000552828 KIAA0100Q14667 2235 aaKnown RBP14.81□□□□□ -0.04
CKAP4-202ENST00000552828 GNRH1P01148 92 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 SLC5A1P13866 664 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 LACTBP83111 547 aaPredicted RBP14.8□□□□□ -0.04
CKAP4-202ENST00000552828 SLC9C1Q4G0N8 1177 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 CDCA7LQ96GN5 454 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 TMEM106CQ9BVX2 250 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 ZNF341Q9BYN7 854 aa14.8□□□□□ -0.04
CKAP4-202ENST00000552828 CIAO1O76071 339 aa14.79□□□□□ -0.04
CKAP4-202ENST00000552828 HABP4Q5JVS0 413 aaKnown RBP14.79□□□□□ -0.04
CKAP4-202ENST00000552828 C17orf99Q6UX52 265 aa14.79□□□□□ -0.04
CKAP4-202ENST00000552828 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
CKAP4-202ENST00000552828 KCNH4Q9UQ05 1017 aa14.79□□□□□ -0.04
CKAP4-202ENST00000552828 DAGLAQ9Y4D2 1042 aa14.79□□□□□ -0.04
CKAP4-202ENST00000552828 SALL1Q9NSC2 1324 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 INPP5BP32019 993 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 PRMT2P55345 433 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 KIF22Q14807 665 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 CDC42EP5Q6NZY7 148 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 ANKRD23Q86SG2 305 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 ARHGAP39Q9C0H5 1083 aa14.78□□□□□ -0.04
CKAP4-202ENST00000552828 NFIAQ12857 509 aa14.77□□□□□ -0.05
CKAP4-202ENST00000552828 MOGSQ13724 837 aa14.77□□□□□ -0.05
CKAP4-202ENST00000552828 DIXDC1Q155Q3 683 aa14.77□□□□□ -0.05
CKAP4-202ENST00000552828 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.05
CKAP4-202ENST00000552828 TRMT2AQ8IZ69 625 aaKnown RBP14.77□□□□□ -0.05
CKAP4-202ENST00000552828 ADGRA2Q96PE1 1338 aa14.76□□□□□ -0.05
CKAP4-202ENST00000552828 SEMA3EO15041 775 aa14.76□□□□□ -0.05
CKAP4-202ENST00000552828 PRDX5P30044 214 aa14.76□□□□□ -0.05
CKAP4-202ENST00000552828 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
CKAP4-202ENST00000552828 GNL3LQ9NVN8 582 aaKnown RBP14.76□□□□□ -0.05
CKAP4-202ENST00000552828 CEP126Q9P2H0 1117 aa14.76□□□□□ -0.05
CKAP4-202ENST00000552828 FAM198AQ9UFP1 575 aa14.76□□□□□ -0.05
CKAP4-202ENST00000552828 PDHXO00330 501 aa14.75□□□□□ -0.05
CKAP4-202ENST00000552828 LDHBP07195 334 aaKnown RBP14.75□□□□□ -0.05
CKAP4-202ENST00000552828 UBTFL1P0CB47 393 aaPredicted RBP14.75□□□□□ -0.05
CKAP4-202ENST00000552828 IL15P40933 162 aaPredicted RBP14.75□□□□□ -0.05
CKAP4-202ENST00000552828 TCP10Q12799 353 aa14.75□□□□□ -0.05
CKAP4-202ENST00000552828 ATP2B3Q16720 1220 aa14.75□□□□□ -0.05
CKAP4-202ENST00000552828 USP40Q9NVE5 1235 aa14.75□□□□□ -0.05
CKAP4-202ENST00000552828 DENND2AQ9ULE3 1009 aa14.75□□□□□ -0.05
CKAP4-202ENST00000552828 ATRNL1Q5VV63 1379 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 CXCL11O14625 94 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 CT47B1P0C2W7 299 aaPredicted RBP14.74□□□□□ -0.05
CKAP4-202ENST00000552828 CTGFP29279 349 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 MAP3K10Q02779 954 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 SLC4A8Q2Y0W8 1093 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 ZFPM1Q8IX07 1006 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 SH3TC2Q8TF17 1288 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 TRIM47Q96LD4 638 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 IDI2Q9BXS1 227 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 SIL1Q9H173 461 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 COPRSQ9NQ92 184 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 SMC4Q9NTJ3 1288 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 SRRDQ9UH36 339 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
CKAP4-202ENST00000552828 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
CKAP4-202ENST00000552828 PHF20L1A8MW92 1017 aa14.73□□□□□ -0.05
CKAP4-202ENST00000552828 PSMC4P43686 418 aa14.73□□□□□ -0.05
CKAP4-202ENST00000552828 PHKA1P46020 1223 aa14.73□□□□□ -0.05
CKAP4-202ENST00000552828 CPA4Q9UI42 421 aa14.73□□□□□ -0.05
CKAP4-202ENST00000552828 GAKO14976 1311 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 PDS5AQ29RF7 1337 aaKnown RBP14.72□□□□□ -0.05
CKAP4-202ENST00000552828 ENTPD3O75355 529 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 HOXD10P28358 340 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 CCDC102BQ68D86 513 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 GPAT2Q6NUI2 795 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 ZGPATQ8N5A5 531 aaKnown RBP14.72□□□□□ -0.05
CKAP4-202ENST00000552828 FAM163AQ96GL9 167 aaPredicted RBP14.72□□□□□ -0.05
CKAP4-202ENST00000552828 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
CKAP4-202ENST00000552828 RFX7Q2KHR2 1363 aa14.72□□□□□ -0.05
CKAP4-202ENST00000552828 BCRP11274 1271 aa14.71□□□□□ -0.05
CKAP4-202ENST00000552828 OSBPP22059 807 aa14.71□□□□□ -0.05
CKAP4-202ENST00000552828 PARK7Q99497 189 aaKnown RBP14.71□□□□□ -0.05
CKAP4-202ENST00000552828 API5Q9BZZ5 524 aaKnown RBP14.71□□□□□ -0.05
CKAP4-202ENST00000552828 LRRFIP2Q9Y608 721 aaKnown RBP14.71□□□□□ -0.05
CKAP4-202ENST00000552828 CEP290O15078 2479 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 A0A0G2JLL6 359 aaPredicted RBP14.7□□□□□ -0.06
CKAP4-202ENST00000552828 FMNL1O95466 1100 aaPredicted RBP14.7□□□□□ -0.06
CKAP4-202ENST00000552828 MYCP01106 439 aaPredicted RBP14.7□□□□□ -0.06
CKAP4-202ENST00000552828 PTPRAP18433 802 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 ADORA1P30542 326 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 RGS3P49796 1198 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 MTFR1Q15390 333 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 SH3BP5LQ7L8J4 393 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 PRRT2Q7Z6L0 340 aaPredicted RBP14.7□□□□□ -0.06
CKAP4-202ENST00000552828 SCYL3Q8IZE3 742 aa14.7□□□□□ -0.06
CKAP4-202ENST00000552828 PA2G4Q9UQ80 394 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms